Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01060 ATGAAAATTAAGGTGGTGGCACCACCAAAGAGGAAGTTCCAGAATAGGAAGGCTAGGTGGAAGACCAAGCAGTTGGAGAAGGACTATGATCTTCTCAAAAGACAATATGATGCTATCAAGGCAGATAATGATGCACTTCAAGCTCAGAACCAAAAACTTCAAACTGAGATATTGGCACTGAAAAGCAGAGAACCAACTGAATCCATCAACCTCAACAAAGAAACTGACGGATCCAGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAACTTGGATATCTCAAGAACACCAGCTATTGACAGTTCTCTATCCACTCAGCAGAGCAACAACAAAACCTTCTTTCCATCTTCTGCTAGACCAACAGGAGTGGCTCAACTTTTCCAAACCACTTCAAGGCCAGAGATTCAGTGCCAAAAGATTGATCACATGGTCAACGAAGAGAGCTTAAGCAACATGTTTTGTGGCATTGATGATCAATCTGGCCTTTGGCCTTGGTTGGAGCAGCAACATTTCAATTGA 519 0.4277 MKIKVVAPPKRKFQNRKARWKTKQLEKDYDLLKRQYDAIKADNDALQAQNQKLQTEILALKSREPTESINLNKETDGSSSNRSENSSEINLDISRTPAIDSSLSTQQSNNKTFFPSSARPTGVAQLFQTTSRPEIQCQKIDHMVNEESLSNMFCGIDDQSGLWPWLEQQHFN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01060 172 MobiDBLite consensus disorder prediction 64 93 - -
Gma18g01060 172 Pfam Homeobox associated leucine zipper 23 63 IPR003106 GO:0006355|GO:0043565
Gma18g01060 172 Coils Coil 15 63 - -
Gma18g01060 172 MobiDBLite consensus disorder prediction 71 93 - -
Gma18g01060 172 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 13 172 IPR045224 GO:0003700
Gma18g01060 172 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 13 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01060 Gma-Chr18 14570005 14573051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01060 13 172 Homeobox Transcription Factor Family AT1G69780 55.814 1.94e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01060 K09338 - gmx:100813236 320.087