Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01056 ATGCAAACACACAGATGGGATTGCTTTTGGATTCTTCTTCTTTGTCGCCAAGAAATTTCAGTTAGAAGGGTACTTCTTTTCATGCTCTATGGTTTCGCCTACTCTGGGCCCTTTGGACATTTTCTCCACAAATTGATGGATAAAATATTTAAGGGGGAGAAAGGCAATGACACTGTTGCTAAGAAGGTGATCCTTGAACAGATAACCAATTCCCCATGGAACAAATTTTTGTTCATGATGTACTATGGCTTGGTTATAGAAGGCTCAAAGTATTTGTATGTCAATGTGGTGTGTTGCTCTGGAATGTGGGAAATTGATATTGGTGTTCCTGATGAAGTTGAAAGACTTGAAGTCCTTCGCGTACATACCAAAAACATGAAGCTTTTAGATGATGTTGATCTAGAGAGAATTGCAAAAGATACTCATGGATATGTTGGTGCTGACCTTGCTGCCCTTTGCACTGAAGCTGCTCTTCAATGCATCAGGGAGAAGATGGATGTCATTGATTTGGAAGATGAAAGTATTGATGCTAAAGTACTGAATTCTATGGCAGTTTCAAATGAGCATTTCTATATTGTTCTAGGAACAAGCAATTCATCTGCTTTACGAGAAATTGTTGTTGAGGTGCCTAATGTTAGCTGGGAGGATATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTGCAAGAGACTGTTCAATATCCTATGGAGCACCCAGAAAAATTTGAGAAGTTTGGTATGTCACCGTCAAAAGGGGTTCTCTTCTATGGTCCTCCAGGATGTGGAAAAACTTTGTTGGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATCCATGTGAAGGGCCCAGAATTGCTCACTATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATTTTTTACAAGACCAGACAATCAACTCCATGTGTCCTCTTCTTTGATGAGCTTGATTCCATTGCTACTCAATTGGGTTGA 978 0.4029 MQTHRWDCFWILLLCRQEISVRRVLLFMLYGFAYSGPFGHFLHKLMDKIFKGEKGNDTVAKKVILEQITNSPWNKFLFMMYYGLVIEGSKYLYVNVVCCSGMWEIDIGVPDEVERLEVLRVHTKNMKLLDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAKVLNSMAVSNEHFYIVLGTSNSSALREIVVEVPNVSWEDIGGLENVKRELQETVQYPMEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIHVKGPELLTMWFGESEANVREIFYKTRQSTPCVLFFDELDSIATQLG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01056 325 Pfam ATPase family associated with various cellular activities (AAA) 252 323 IPR003959 GO:0005524|GO:0016887
Gma18g01056 325 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 104 324 - -
Gma18g01056 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 323 IPR027417 -
Gma18g01056 325 Pfam AAA+ lid domain 131 173 IPR041569 -
Gma18g01056 325 Gene3D - 110 205 - -
Gma18g01056 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 185 IPR027417 -
Gma18g01056 325 PANTHER AAA-FAMILY ATPASE 104 324 - -
Gma18g01056 325 CDD AAA 218 324 - -
Gma18g01056 325 Gene3D - 209 323 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01056 Gma-Chr18 14473885 14480022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01056 181 325 Calmodulin-binding Proteins AT3G56690 46.207 2.65e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01056 K13525 - gmx:102661243 447.203