Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01055 atgggtgggataggtaaaacggcccttgctactactttatatgacaaattatctcatgaatttgaaggcagttccttcctctcaaacgtaaatgaaaaATCAGACAAGCTTGAAAATCACTGTTTTGGTAATtctgatatgagtacgcttcgaggtaaaaaagctctcattgtcttggacgatgtggctacctcggaacatctagaaaaattaaaagtagattatgatttcttggaaccaggaagtagagtcattgttacaactagaaatagggaaatacttggccccaatgacgaaatttatcaagtcaaggaattgagttctcatcactctgttcagcttttttgtttgactgtttttggagaaaaacaacctaaagaggggtatgaagacctatcagaaagagtactttcctattgcaaaggtattcctttggctttaaaagttatgggtgcaagtcttcgtcgaaaaagtaaagaggcatgggagagtgaattgagaaaactccaaaagatttcgagtatggaaattcatacagtattaaaattaagttatgatggcttagatcattctcagaaggacatatttttggacattgcatgcttctttaaaggacgagaaagagattgggtaacaagagtattggatgcttttgatttctttgcagcatctgggatagaagtccttttagataaagctcttataactatttcagaaggcaatcacatagaaatgcatgacttgatacaggaaatgggttgggaaattgttcgtcaagaatgtatcaaagaccctggaagacaaagccgattgtggagacaagaggaagtgcaaaatatattgaaatataacagggcaagtggAAAATGCAATTTCTTTTATTTGATAAAGGGAACTGATGTTGTTGAAGGCATAATTTTATCTTTGCGGAAATTAACTGAAGCTCTACGTTTGAGCTTTGATTTCCTTGCAAAGATGACTAACCTGAGATTTCTTCAATTCTATGATGGTTGGGATGATTATGGTTCTAAAGTGCCCGTTCCTACTGGTTTTGAGTCATTGCCTGATAAATTGAGGTACCTTCATTGGGAAGGATTCTGCCTTGAGTCTTTGCCACTTAACTTTTGTGCTGAACAGCTTGTGGAGCTTTACATGCCTTTTAGCAAGCTTAAAAAGCTTTGGGATGGGGTTCAGAATCTTGTGAATTTAAAGATAATTGGCCTTCAGGGCTCCAAAGACTTGATTGAGGTCCCAGACTTATCCAAGGCAGAAAAACTGGAAATTGTTAATCTTTCTTTTTGTGTAAGCTTGCTTCAGCTCCATGTTTATTCAAAATCTCTCCAAGGACTTAATGCCAAAAACTGTTCATCTCTCAAGGAATTCTCAGTGACATCAGAGGAAATAACAGAATTGAACTTAGCTGACACAGCTATATGTGAATTGCCGCCATCAATTTGGCAAAAGAAGAAACTCGCTTTTCTTGTCCTAAACGGCTGTAAAAATCTTAAGTTTTTTGGGAACGAAATTGTTCACTTACTGTCTTCAAAAAGGTTAGACCTATCTCAAACTAATATTGAGAGGTTGTCTGCACTTCCACCATCCCTAAAATATTTGATGGCCGAGGGCTGCACTTCTCTGGAAACAAACTTCACTCAACATTTAGTGTTACACCACATGATACAAAGCCGCATACCCTACTTACACAAACATCCTAGTAACCCCGGGTATTATAATAACCATGAATGCTTCTTCTTCCCGGGGGACCGCATCACCAAAGCGTGTGGGTTTTGCACAGGAGATAGTTCAATAACTATTCCTTATCTTCCAAAATCTGACTTGCACGGTTTCATTTATTGCATCATTTTTTCTGAGGGAATTTACGGAAAGAGAAGCAGCGTACTTTCATGTTCTATCAATCAAGACGGTATACAGGTCGGCCAGGACCAGAAGACAATATATATCCCAGATTTATTTTTAGATCATGTGTTATTTTGGTATCATGACATCAGACAATTTGACAGAATAAGAGAAGTGTGTGATCATTTCAGCGACCTAACAATTTCATTTGAACATAAACACTTATTTCGTGGCGTGAAGATTACATGGGGCATAAAAGAGTGTGGGGTCTTCCCAGTATATGCCAGGGCATCAGGGTTTAAGGTGGTTGGTAGTAATAGCAAGGAAACTTTTGAATGTGAATCCATTACTCAAATCTCTAATAATGAGTCACAGCCCAGACCCAGAGCGATCAGAGTTGAAGCTGGAGTTAGAGGCTCTAATAATGAAAATGAAGAAGACAGGAGCAACTTCCTGCAGCAAAAGAGCATGAGGACTTCACCATAA 2343 0.2527 MGGIGKTALATTLYDKLSHEFEGSSFLSNVNEKSDKLENHCFGNSDMSTLRGKKALIVLDDVATSEHLEKLKVDYDFLEPGSRVIVTTRNREILGPNDEIYQVKELSSHHSVQLFCLTVFGEKQPKEGYEDLSERVLSYCKGIPLALKVMGASLRRKSKEAWESELRKLQKISSMEIHTVLKLSYDGLDHSQKDIFLDIACFFKGRERDWVTRVLDAFDFFAASGIEVLLDKALITISEGNHIEMHDLIQEMGWEIVRQECIKDPGRQSRLWRQEEVQNILKYNRASGKCNFFYLIKGTDVVEGIILSLRKLTEALRLSFDFLAKMTNLRFLQFYDGWDDYGSKVPVPTGFESLPDKLRYLHWEGFCLESLPLNFCAEQLVELYMPFSKLKKLWDGVQNLVNLKIIGLQGSKDLIEVPDLSKAEKLEIVNLSFCVSLLQLHVYSKSLQGLNAKNCSSLKEFSVTSEEITELNLADTAICELPPSIWQKKKLAFLVLNGCKNLKFFGNEIVHLLSSKRLDLSQTNIERLSALPPSLKYLMAEGCTSLETNFTQHLVLHHMIQSRIPYLHKHPSNPGYYNNHECFFFPGDRITKACGFCTGDSSITIPYLPKSDLHGFIYCIIFSEGIYGKRSSVLSCSINQDGIQVGQDQKTIYIPDLFLDHVLFWYHDIRQFDRIREVCDHFSDLTISFEHKHLFRGVKITWGIKECGVFPVYARASGFKVVGSNSKETFECESITQISNNESQPRPRAIRVEAGVRGSNNENEEDRSNFLQQKSMRTSP 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01055 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 513 742 IPR044974 GO:0006952
Gma18g01055 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 513 IPR044974 GO:0006952
Gma18g01055 780 Gene3D - 1 102 IPR027417 -
Gma18g01055 780 Pfam NB-ARC domain 47 179 IPR002182 GO:0043531
Gma18g01055 780 Pfam Leucine Rich Repeat 379 398 IPR011713 -
Gma18g01055 780 Gene3D Ribonuclease Inhibitor 468 563 IPR032675 -
Gma18g01055 780 Gene3D Ribonuclease Inhibitor 302 467 IPR032675 -
Gma18g01055 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 199 IPR027417 -
Gma18g01055 780 MobiDBLite consensus disorder prediction 753 780 - -
Gma18g01055 780 SUPERFAMILY L domain-like 315 563 - -
Gma18g01055 780 SUPERFAMILY "Winged helix" DNA-binding domain 176 282 IPR036390 -
Gma18g01055 780 Gene3D - 105 189 IPR042197 -
Gma18g01055 780 PRINTS Disease resistance protein signature 49 63 - -
Gma18g01055 780 PRINTS Disease resistance protein signature 140 154 - -
Gma18g01055 780 PRINTS Disease resistance protein signature 398 414 - -
Gma18g01055 780 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 513 742 - -
Gma18g01055 780 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01055 Gma-Chr18 14436141 14438879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01055 1 590 WRKY Transcription Factor Family AT5G45050 31.415 6.82e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01055 - - gmx:100809480 1548.49