Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01040 ATGGCTCTTCACATAAGCAGTGGTTGTTTTACTGTGATGTGTAATTCAAGAGTTCACAGAATAAGAGCTGTTGCTTCAGAGGGTTCTGCTACTCTTAATACAGTGGTGGAGGAGAAGGTGAAGTTGGGTGGCTCTGATTTGAAGGTGTCAGGGGTTGGAATTGGAGCTTGGTCTTGGGGTGATACCACTTACTGGAACAATTTTGAATGGAATGATAGGAATGAGAAGGCTGCTAGAGCTGCTTTCAATACCAGTATTGATGGAGGTCTAACCTTTTTTGACACTGCTGAAGTCTATGGCTCTGGGCTTGCTTTAGGAGCCATAAATTCTGAGGTTCTTCTTGGAAGATATATTAAGGAAAGAAAAGAAAAGGATCCAGAGGTTGAGATTGAAGTAGCAACCAAGTTTGCTGCACTGCCGTGGAGATTTGGCCGTCAAAGTGTTCTCAATGCCCTTAAAGATTCCCTTTGTCGACTAGGACTGACTTCAGTGGATCTTTATCAGCTACATTGGCCTGGAGTTTGGGGAAATGAAGGGTATATTGATGGTCTGGGAGATGCTGTTGAGAAGGGACTTGTGAAGGCCGTTGGAGTTTCAAACTATAGTGAGAAGCGACTCCGTGAGGCTTATGAGAAGCTTAAGAAGAGAGGTATTCCATTAGCTACAAACCAAGTAAACTACAGCCTCATCTACCGGGCCCCTGAAGAAAATGGTGTAAAGGCTGCCTGTGATGAACTTGGGATAACAATAATTGCATATTCACCAATTGCTCAAGGTGCTCTCACTGGAAAGTATACTCCTGATAAACCACCAAGTGGGCCAAGGGGCAGAATTTATACTCCAGAATTCCTAACAAAGCTCCAACCTTTGCTGAACAAGATCAGTGAAATAGGGGAGAAGTATGATAAAACTCCAACACAGGTATCCCTGAACTGGCTGGTAGCACAAGGCAATGTTGTGCCAATTCCAGGAGCCAAGACAGCAGAACAAGCTGAGGAATTCAGAGGTGCACTTGGCTGGAGACTAACTGATGAAGAGCTCAGACAACTGATTTGGTTAGCCATGAACAACAGTGTTCCTGATTGGAATTTTGGGAGTGATTCCTGTGTCACCACCACCAATCAAAAGAAGCCCATGATAGGGGTGGACCAAGAGCTTGTAGAGCTTCAGTGGCAAAATGGCCAGGTAGTGATGCACAGCCAAACACACAGAAAACCGTTTGTGAATTCCATCACGCCGAGACCGCTTCGGAGGAATTTTCAATCAACATTAAGGACTAGTGAGCCATTTGGGAACTCAAGTAACTTGATTCAAGATGATGAGACAGTCTCATGGATCCAATACCCTCTTGAGGATCCATTGGAACAAGAGTTCTGTTCAAACCTTTTATCTGAACTGGCACCTTGTGAAGTTGAGTCCTATAAGCAAATCAAGCCATTTGAAGAGGGGAAGTTTACCAAATTGGATGCCTCTAGTACCCCCCATGTGACTGAAACTTCGCAATCACCTACCATGAAATCTTCCTCTTTTCAGGAATTCTCAGGAATTCCTATACCTGCTCCAAGATTCCATGTTTCTGATTCACCTCAGAAAAACAATAATGACTTGGGTGGATCATGTAAGGTCCAAAACTTCTCTCACTTTTCAGCACCTCTTAATGTTTCTTCAGCATCGGCTAACGCGCATTTTAGGGACAAAATTACTGGTAACATGTCAAAAAATGAGATTAGAGAGTGCTCATTGATGACAGTTGGATCAAGTTACTGTGGTAGCAATCACATCCCCCAAGATCCAGATGCAAGCAGGGCATCAAGCAATGGTGTCTGGACTACTACTTTATCCGCCGAGCCTGAAGCTGTTAGAGACCATGTGCCGAGAACAAGTCCTCAGAATGAAAAAGGGAAATCGGAGATGCTTGAACCAACTACAACTTCATCATCCGGTGGCTCAGGTAGTAGTCTTGGAAAAAATTGTTCGCTATCTACGAGAAACCAGGGCCAAAAAAGAAAAGGAATAGATGTGGAAGAATCTGAGGAGCAAAGTGAGGACACAGAACTTAAATCAGCACTTGGAAACAAGTCATCTCAACGTGCAGGGTTGGCTCGAAGGAACCGCGCTGCTGAAGTGCATAATCTATCTGAAAGGAGAAGGAGAGACCGGATCAATGAGAAGATGAAGGCATTGCAACAACTCATACCTCACAGTAGCAAGACAGACAAAGCATCAATGTTGGAAGAGGCAATCGAATACTTGAAATCACTTCAGTTACAACTTCAGCTAATGTGGATGGGATCTGGCATGGCACCAATTATGTTTCCAGGAATTCAGCACTATATGTCACAAATGGGTATGGGAATGGCTACACCGCCTTTCCCTCCTATTCACAATCCGATGCAATTACCGAGACTGCCGCTTGATCAGTCTGTATCTGCGTCTCAGACACCAAACCAGACATTAATGAGCCAAAATCCTATTTTGGGTGCCTTTAATTACCACAATCAGATGCAAAATCCAGCTCTTTCAGAGCAATATGCGCGTTACATGGGCTATCATCTTATGCAAAATGCCTCTCAGCCAATGAATGTATTCAGATATGGTCCCCAGGGGGTACGGCATAGTCAAACAATGATTACACCCAGCAACAGCAGTGGAAACATGAGTGGAGCAGCAAATATTGATGAGGCTGTGAGTGGCAAAATGGGTTAA 2706 0.4412 MALHISSGCFTVMCNSRVHRIRAVASEGSATLNTVVEEKVKLGGSDLKVSGVGIGAWSWGDTTYWNNFEWNDRNEKAARAAFNTSIDGGLTFFDTAEVYGSGLALGAINSEVLLGRYIKERKEKDPEVEIEVATKFAALPWRFGRQSVLNALKDSLCRLGLTSVDLYQLHWPGVWGNEGYIDGLGDAVEKGLVKAVGVSNYSEKRLREAYEKLKKRGIPLATNQVNYSLIYRAPEENGVKAACDELGITIIAYSPIAQGALTGKYTPDKPPSGPRGRIYTPEFLTKLQPLLNKISEIGEKYDKTPTQVSLNWLVAQGNVVPIPGAKTAEQAEEFRGALGWRLTDEELRQLIWLAMNNSVPDWNFGSDSCVTTTNQKKPMIGVDQELVELQWQNGQVVMHSQTHRKPFVNSITPRPLRRNFQSTLRTSEPFGNSSNLIQDDETVSWIQYPLEDPLEQEFCSNLLSELAPCEVESYKQIKPFEEGKFTKLDASSTPHVTETSQSPTMKSSSFQEFSGIPIPAPRFHVSDSPQKNNNDLGGSCKVQNFSHFSAPLNVSSASANAHFRDKITGNMSKNEIRECSLMTVGSSYCGSNHIPQDPDASRASSNGVWTTTLSAEPEAVRDHVPRTSPQNEKGKSEMLEPTTTSSSGGSGSSLGKNCSLSTRNQGQKRKGIDVEESEEQSEDTELKSALGNKSSQRAGLARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQLMWMGSGMAPIMFPGIQHYMSQMGMGMATPPFPPIHNPMQLPRLPLDQSVSASQTPNQTLMSQNPILGAFNYHNQMQNPALSEQYARYMGYHLMQNASQPMNVFRYGPQGVRHSQTMITPSNSSGNMSGAANIDEAVSGKMG 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01040 901 ProSitePatterns Aldo/keto reductase family signature 2. 184 201 IPR018170 GO:0016491
Gma18g01040 901 SMART finulus 711 760 IPR011598 GO:0046983
Gma18g01040 901 CDD AKR_AtPLR-like 48 350 - -
Gma18g01040 901 PANTHER OS07G0143000 PROTEIN 16 354 - -
Gma18g01040 901 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 16 354 - -
Gma18g01040 901 MobiDBLite consensus disorder prediction 878 901 - -
Gma18g01040 901 Gene3D - 701 761 IPR036638 GO:0046983
Gma18g01040 901 MobiDBLite consensus disorder prediction 491 511 - -
Gma18g01040 901 MobiDBLite consensus disorder prediction 614 717 - -
Gma18g01040 901 PRINTS Aldo-keto reductase signature 85 109 IPR020471 GO:0016491
Gma18g01040 901 PRINTS Aldo-keto reductase signature 184 201 IPR020471 GO:0016491
Gma18g01040 901 Coils Coil 711 731 - -
Gma18g01040 901 Gene3D - 38 364 IPR036812 -
Gma18g01040 901 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 705 754 IPR011598 GO:0046983
Gma18g01040 901 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 703 766 IPR036638 GO:0046983
Gma18g01040 901 Pfam Aldo/keto reductase family 52 350 IPR023210 -
Gma18g01040 901 MobiDBLite consensus disorder prediction 703 717 - -
Gma18g01040 901 CDD bHLH_AtPIF_like 705 768 - -
Gma18g01040 901 MobiDBLite consensus disorder prediction 631 667 - -
Gma18g01040 901 SUPERFAMILY NAD(P)-linked oxidoreductase 39 350 IPR036812 -
Gma18g01040 901 Pfam Helix-loop-helix DNA-binding domain 709 755 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01040 Gma-Chr18 13979768 13991966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01040 580 901 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G59060 39.193 1.56e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma18g01040 Aldo_ket_red 1.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01040 - K16189 gmx:100784531 1062.75