Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01026 ATGACTACAACAATTGCTATTGAAGATGTGAGAAGGGAGGTGAAAATACTTCGAGCTTTGAATGGACACAACAATCTGATCCAGTTCTATGATGCATTTGAAGATCAAGACAATGTCTACATTATAATGGAGTTATGTGAAGGGGGAGAGCTCTTAGATATGATATTATCAAGAGGAGGGAAATACTTAGAAGATGATGCAAAGGCTGTCATGGTACAGATACTTAATGTTGCTGCATTTTGTCATCTTCAGGGTGTGGTACACCGAGATCTTAAGCCAGAGGATCCTACTGCCCGACTACAACACGCAAAGTTTCTTGTGACAGTAGAAGGGTTGAATGATGATTTGAAGAGGACTTGA 360 0.4 MTTTIAIEDVRREVKILRALNGHNNLIQFYDAFEDQDNVYIIMELCEGGELLDMILSRGGKYLEDDAKAVMVQILNVAAFCHLQGVVHRDLKPEDPTARLQHAKFLVTVEGLNDDLKRT 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01026 119 Pfam Protein kinase domain 8 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01026 119 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01026 119 Gene3D Transferase(Phosphotransferase) domain 1 2 95 - -
Gma18g01026 119 SMART serkin_6 3 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01026 119 PANTHER CDPK-RELATED KINASE 7 1 95 - -
Gma18g01026 119 SUPERFAMILY Protein kinase-like (PK-like) 6 94 IPR011009 -
Gma18g01026 119 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01026 Gma-Chr18 13563164 13566452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01026 1 95 EF-hand Containing Proteins AT3G50530 85.263 7.57e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma18g01026 Pkinase 1.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01026 - K00924 gmx:100807672 184.496