Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01022 ATGAAGAATTCTAAGAAAACTGGAGTACGGAAGTACCACAAATCGGAAAATCCACGCTTGCGGTGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAAAAAACAAGGCAACACCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTGAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAGCATGAAGGGACATACGATTCTCGCATCAATGCAACAGGAGATGGAAGAAAATGTGCATGTTAACGACCATCACTCAATCTGCTCCAACTGTTCATCCCAAAGATCACAAGAAATTCACCCGTTAGAAAGTAAAGGACTTTCACAGACCAGTGAAACTGATAATTACGATCTAAATCAGGAACCCGAGTCAAGTGCTTGTTTATTTAGTGATACGTCAAATGAAGAAAATAGTAGGACAATGAAATTTCTTGATCTCTCATTCTCTTTCGGCTCTCCACTAACTCCAACGATTGACGGTGATCAAGAGAGAATGCGTTTCTCTTCGCCAAATACAGCAGATAATATTCATGTCATCGATTCTAATTCTGTAGAATCTCATGGGAGCAATTATATAAATTTAGACCTAACAATATGA 627 0.3971 MKNSKKTGVRKYHKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRSMKGHTILASMQQEMEENVHVNDHHSICSNCSSQRSQEIHPLESKGLSQTSETDNYDLNQEPESSACLFSDTSNEENSRTMKFLDLSFSFGSPLTPTIDGDQERMRFSSPNTADNIHVIDSNSVESHGSNYINLDLTI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01022 208 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Gma18g01022 208 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Gma18g01022 208 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Gma18g01022 208 Gene3D - 17 74 - -
Gma18g01022 208 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 155 IPR044848 GO:0003700
Gma18g01022 208 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 2 155 - -
Gma18g01022 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Gma18g01022 208 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01022 Gma-Chr18 13494983 13499917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01022 8 73 G2-like Transcription Factor Family AT1G14600 65.152 2.27e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma18g01022 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01022 - - gmx:100791958 425.246