Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01019 ATGATGCTTACCTTGCTTAAGCAAAGATCTCTGATTTCAACACTAGCCCCTTCTTTTCCATTCATCACCACCCAAACCCATTTCTCTTCTTTACTGCAACAACAACAACAACACAAACCATCCATTTTCCTCAACCCCTTTTCTTCCAAATCCAAATCCAAATCCCAAACCAAAAATCCTAACTTCACCCTCTCCTACCTCATCAACACCTGCAACCTGTCCCCCGCGTGGGCCCTCAAGCTCTCTAAAAGGGTCCACCTCAAATCCCCCGATCAGCCTAACGCCGTCCTTAACCTCCTCAAAACCTTCGGATTCTCCGAACTCCAGTTGTCCCTCCTTGTCAAACGCTTCCCCATAGTCCTCAAGATCAAACCCGAAAAGACCATTCTGCCCAAGCTCCAGTTCTTCCTCTCCATCGGCCTCTCCACCTCCGACCTCCCCAAACTCCTCATCGGAAACTCCGTCCTCTTGGAAGGCAGCCTCAAGTACTGCCTTGTTCCGCGCTACAACATCCTCAGCACTGTCCTCAGAGACAGAGACAAGGTTGTTTTGGCCTTAAAACGTGTTCCCTGGTGCCTCACCGGCCGTGGCTTGATCAACCATTTGATCCCCAACGTGGAGCACCTAAGAGGTGTAGGGGTGCCGCAGGGCCCCATTGCCCACCTGGTGTGCAACCACCTCGGTGTGGTGTGTGTGGAGCACACGAAATTCGTGGAGGCTGTGGAGAAGGTGGTGAAATTCGGGTTTGATCCGATGAAAACCATGTTTGTGGAGGCGGTGAAGGTGGTGGTTGGGACTAGCAAGGAGGCTTGGGAGAAGAGGGTGGAGGTTTATGAGAGGTGGGGTTGGTCTAATGAGATGTGTCTTTGTGCCTTCAGGAGGTACCCTCAGTGTATGTTGATGTCGGAGGATAAGGTCATGAGGACCATGAGGTTTTTGGTTAAGGATATGGGGTGGCCTGCAGAGGATATTTTTCGGACTCCGGGGGTTCTCAGCCCCAACTTGGAGAAGACAATTATGCCGCGGTCTCGCGTTATGAAGGTGTTGAAGGAGAGGGGGCTGGTGAAGAGTGACTCACGGCTTAGCTCGGCTATTTTGATCACCGAGAAGTTGTTTTTGGAGAAGTTTGTGGGGCGGTTCCAGGATCGTGTACCGGGGCTTATGGAGGTGTATAAAGGGCACGTTGATCACCTGGATTCGGTGCTGTAG 1209 0.517 MMLTLLKQRSLISTLAPSFPFITTQTHFSSLLQQQQQHKPSIFLNPFSSKSKSKSQTKNPNFTLSYLINTCNLSPAWALKLSKRVHLKSPDQPNAVLNLLKTFGFSELQLSLLVKRFPIVLKIKPEKTILPKLQFFLSIGLSTSDLPKLLIGNSVLLEGSLKYCLVPRYNILSTVLRDRDKVVLALKRVPWCLTGRGLINHLIPNVEHLRGVGVPQGPIAHLVCNHLGVVCVEHTKFVEAVEKVVKFGFDPMKTMFVEAVKVVVGTSKEAWEKRVEVYERWGWSNEMCLCAFRRYPQCMLMSEDKVMRTMRFLVKDMGWPAEDIFRTPGVLSPNLEKTIMPRSRVMKVLKERGLVKSDSRLSSAILITEKLFLEKFVGRFQDRVPGLMEVYKGHVDHLDSVL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01019 402 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 395 - -
Gma18g01019 402 PANTHER CGI-12 PROTEIN-RELATED 33 395 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 Pfam mTERF 259 372 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 Pfam mTERF 97 286 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 Gene3D Transcription termination factor 3, mitochondrial 75 198 IPR038538 -
Gma18g01019 402 Gene3D Transcription termination factor 3, mitochondrial 199 382 IPR038538 -
Gma18g01019 402 SMART mt_12 254 284 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 SMART mt_12 183 215 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Gma18g01019 402 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01019 Gma-Chr18 13304867 13306649 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma18g01019 mTERF 3.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01019 K15032 - gmx:100778090 771.541