Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01018 ATGGCAAGATTAACTGCATCATCATCATTCGCACGCCAAAGCACTACCCATATTCAATTGGGTTCTCTTCTGCAACACAAACACAATGCTTTCCCTTTTTCCTTCACTTCACTCACTTCAGGCACCTCTTCTGATTCTGAATCAGATGGAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATTAACTCATGTGGGGTGTCCCCAAAACTGGCCAAGGAGCTCTCCAACAGGGTCAATTTGAAAAACGCACATGGCCCAAATGCTGTTCTTGATCTTCTCAACAACTATGGTTTGTCCAAAATCCAGGTTGCAAAACTCGTTGAGAAATATCCCAAAGTTCTTATTATAAAGGCAGAGAAAACCCTTTTGCCTAAACTGAAGTTCTTCCGTTCTATTGGGGTTTCCAACACTGACATGCCAAAGATCCTACTTCGTAACTATGTTATCTTGAAGAGTAGCTTGGAAAATTACCTCATCCCCCGCTATGAGATCCTGCGTGATATAGTCGGCGATGATCAGAAAGTTGTTAGATCTTTGAAAATTACCGCTTTTTGTCTTACATATGGTGACATGATGAATAACTTTGTTCCAAACATTAAGGTTTTGAGGCAATCTAGTGTGCCTCAAACTTCCATCTCTCTCTTGATGGGCCATTTTCCTGGTGCAGCATATAGGAAGCATTCCAAATTTGTGGAAGCTGTCAAGACTGCTAAGGAAATTGGGTGTGATCCTTTGAAAGTATCTTTTGTGCAGGCTGTCCATTTGCTTTTATCTACTAGTAAAGCAATGCTGGATTCAAAATTTGAGGTTTATGAGAGGTGGGGCTGGAGCTACAAAATAGCTCTTCGAGCATTTGGCAAGTTTCCCTTTTTTATGGTGTTGTCAAAGGAGACATATACAAAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTTGCCATCAGAAGATATTGCTGATTATCCTCTTGTTCTATCTTACAGCTTAGAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGCAATCAAATAATCTGCCTAGGAATGATTTTCACTTCGGTTCCTTTATTTGCATAAATGAGAAAAACTTTCTGAAGAAATTTGTCATCAAATTTCAGGATGATTTGCCTCATTTATCTGATGTCTACAAAGGGTTGATCAATAATCAGAATGAAATATAG 1194 0.3911 MARLTASSSFARQSTTHIQLGSLLQHKHNAFPFSFTSLTSGTSSDSESDGNHHKGDTFTVSYLINSCGVSPKLAKELSNRVNLKNAHGPNAVLDLLNNYGLSKIQVAKLVEKYPKVLIIKAEKTLLPKLKFFRSIGVSNTDMPKILLRNYVILKSSLENYLIPRYEILRDIVGDDQKVVRSLKITAFCLTYGDMMNNFVPNIKVLRQSSVPQTSISLLMGHFPGAAYRKHSKFVEAVKTAKEIGCDPLKVSFVQAVHLLLSTSKAMLDSKFEVYERWGWSYKIALRAFGKFPFFMVLSKETYTKKMSFLVKDMGLPSEDIADYPLVLSYSLEKRIIPRFSVIKILQSNNLPRNDFHFGSFICINEKNFLKKFVIKFQDDLPHLSDVYKGLINNQNEI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01018 397 Gene3D Transcription termination factor 3, mitochondrial 64 193 IPR038538 -
Gma18g01018 397 Gene3D Transcription termination factor 3, mitochondrial 194 379 IPR038538 -
Gma18g01018 397 Pfam mTERF 182 368 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 Pfam mTERF 93 301 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 PANTHER CGI-12 PROTEIN-RELATED 33 390 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 390 - -
Gma18g01018 397 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 SMART mt_12 250 280 IPR003690 GO:0003690|GO:0006355
Gma18g01018 397 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01018 Gma-Chr18 13299972 13301168 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma18g01018 mTERF 2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01018 K15032 - gmx:100788793 765.377