Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01017 ATGGTGCGTAATTTTCTCCTCATTGCAAGATTAACTGCGTCATCATCATTCACACGCTACAAGAGCACCCATATCCCATTGGGTTCTCTGTTGCAACTCAAACACACTGCTTCAATTTTTTTCTTCAATTCATTCACTTCAGCCAGCTCTTCTGATTCTGAATCAGATGGAAACCGCCACAAAGATGGCCCAGATGCTGTTATTGATATGCTCAGCAACTATGGGTTTGACAAAATCCAGGTTGCAAAACTTGCGAAGAAACAACCTTTGGTGCTTCTTGAGGATGCAGAGAATACCCTTTTGCCTAAACTCGAGTTCTTCCGTTCTATTGGGGTTTCCAACACTGACATGCCTAAGATCCTAATTGCTAACCGTGATATCTTGTTTAGAAGCTTGGAGAAATGTCTCATCCCTCGTTATCAGATCCTAAAGAGTGTAGTTTGTGATGATGGGGAAGCTGTTACTGCTTTGATAAATGCCCCATTTGATTTTACAAATGGTGACATGATGAATCATTTGGTTCCAAACATTAAGGTTCAGAGGCAATCTAATGTGCCTCCAGCTTCCATCTCTCTCTTGATGGTCCATTTTACAGGTGTAGCATATATGAAGCATTCCAAATTTGTGGAAGCTGTCAACAAAGCCAGGGAAATAGGTTGTGATCCTTCGAAAATGGTTTTTATGCATGCTGTCCGTTTGCTTTTAACTACTAGTAAAACCTTGTGGGATTCAAAATTTGAGGTTTATGAGAGGTGGGGCTGGAACCACGAAATGGCTCTTCGAGCATTTGTCAAGTCTCCCAATTTTATGATGTTGTCAGAGGAGACATATACAAAAAAGATGACTTTCCTAGTGAAGGATATGGGTTTGCCATCAGAAGATATTGCTCATTATCCTCAGGTTCTAACCTACAGCTTTGAGAAGAGGATTATACCTAGATTCTCAGTAATTAAAATCTTGTGTTCAAAAGGTCTGCTTAAGAAAGATTTGCACTTCAGTTCCTTTATGTGCTTAACTGAGGGAAACTTTTTGAAGAAATTTGTCATCAAATTTCAGGATGATTTGCCTCTTTTATCAGATGTTTACAAAGGTTTGTTCAATCATCAGAATGTAGTATAG 1119 0.3932 MVRNFLLIARLTASSSFTRYKSTHIPLGSLLQLKHTASIFFFNSFTSASSSDSESDGNRHKDGPDAVIDMLSNYGFDKIQVAKLAKKQPLVLLEDAENTLLPKLEFFRSIGVSNTDMPKILIANRDILFRSLEKCLIPRYQILKSVVCDDGEAVTALINAPFDFTNGDMMNHLVPNIKVQRQSNVPPASISLLMVHFTGVAYMKHSKFVEAVNKAREIGCDPSKMVFMHAVRLLLTTSKTLWDSKFEVYERWGWNHEMALRAFVKSPNFMMLSEETYTKKMTFLVKDMGLPSEDIAHYPQVLTYSFEKRIIPRFSVIKILCSKGLLKKDLHFSSFMCLTEGNFLKKFVIKFQDDLPLLSDVYKGLFNHQNVV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01017 372 Pfam mTERF 68 281 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 Pfam mTERF 241 343 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 61 365 - -
Gma18g01017 372 PANTHER CGI-12 PROTEIN-RELATED 61 365 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 Gene3D Transcription termination factor 3, mitochondrial 57 167 IPR038538 -
Gma18g01017 372 Gene3D Transcription termination factor 3, mitochondrial 168 354 IPR038538 -
Gma18g01017 372 SMART mt_12 82 113 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 SMART mt_12 260 291 IPR003690 GO:0003690|GO:0006355
Gma18g01017 372 SMART mt_12 292 326 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01017 Gma-Chr18 13273973 13275187 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma18g01017 mTERF 1.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01017 K15032 - gmx:100788793 467.233