Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01011 ATGCCAAATCTGACAACGTTCACTGAAATCTATGGAAACTACCACAAAGGTGACACTTTTACTGTGTCTTATCTCATCAACTCATGTGGGGTGTCCCCAAGAAAAGCCAAGGAACTCTCCAATAGGATCAATTTGAAAACCCCAGATGGCCCAAATGCTGTTATTGATCTTCTCAACAACTATGGCTTCACCAAAACCCATCTTGCAAAACTTGTGGAGAAACACCCTTTGGTGCTTGTTGCGGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGCTTTCCAACACTGATATGCGTAAGATTTTAATTGCTAACCATACCTTGAACAGGAGCTTGAAAAAATTCTTCATCCCACGTTATGAGATCCTCAGACGTGTACTTGGTGATGATCAGGAAGTTGTTAGAGCTATAACAAATTCCCGATTTGGTTTTACATATGGTGACACAATGAACTTGGTTCCAAACATTGAGGTTTTGAGGCAGTCTGGTGTGCCGCAAGCTTCTATCACTTTCCTGATGATCAATTCTGCGACTGTAGCCTACTGGAAGCATTCCAGATTTGTGGAAGCTGTCAACACTGCTAAGGAAATTGGGCTTAATCCCTTGAGAACAAATTTTATTGTGGCCGTTGAAATGCTTCTAATTAGGAGCAAAGCCGTATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGGGGTTGGAATCGCGAAATGGCTCTTCAAGTATTTCGAAAGTTTCCCTGTGTTATGAAGTTGTCAGAGGAGACGTTTGCCAAAAAAATGAGTTTCCTAGTTAAAGATATGGGTTGGTTATCAGAAGATATTGCTGAATATCCTCAGGTGATAGCGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGGTAATCAAAATCTTGAAATCAAAAGGTCTGATTGAGAACAAATTGCACTTAAGTGCCATTATTTGCATAACTGAGAAAAAATTTCTAGAGAATTTTGTGGTCAGTTTTCAGAAAGATTTGCCTCTCTTACCAGATGTCTATGGTGGAAAGGTCAAGCCTTCAAATGTAATGTAA 1074 0.4022 MPNLTTFTEIYGNYHKGDTFTVSYLINSCGVSPRKAKELSNRINLKTPDGPNAVIDLLNNYGFTKTHLAKLVEKHPLVLVADAENTLLPKLKFFRSIGLSNTDMRKILIANHTLNRSLKKFFIPRYEILRRVLGDDQEVVRAITNSRFGFTYGDTMNLVPNIEVLRQSGVPQASITFLMINSATVAYWKHSRFVEAVNTAKEIGLNPLRTNFIVAVEMLLIRSKAVWESRFEVYERWGWNREMALQVFRKFPCVMKLSEETFAKKMSFLVKDMGWLSEDIAEYPQVIAYNLEKRIIPRFSVIKILKSKGLIENKLHLSAIICITEKKFLENFVVSFQKDLPLLPDVYGGKVKPSNVM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01011 357 Gene3D Transcription termination factor 3, mitochondrial 109 340 IPR038538 -
Gma18g01011 357 Pfam mTERF 55 256 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 Pfam mTERF 222 329 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 SMART mt_12 277 311 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 SMART mt_12 69 100 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 PANTHER CGI-12 PROTEIN-RELATED 11 351 IPR003690 GO:0003690|GO:0006355
Gma18g01011 357 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 11 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01011 Gma-Chr18 13193941 13195263 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma18g01011 mTERF 4.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01011 K15032 - gmx:100786128 712.22