Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00998 ATGAATGTTAAGGTGCATAGCTCTGATGATACCAAGAAGGATGAAGAGGTTGTGCTTCCTGGCTTTAGATTCCACCCCACGGATGAAGAGCTTGTTGGGTTTTATCTGCAGAGAAAGGTGGACAAAAAGCCTCTAAAAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCTTTTGGGGACAAAGAGTGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGAAACAGCGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAGGCCACAGGGATTGACAAGTCCATATATTGCGTGAAAGAACCCCATGAATGCATTGGCCTGAAGAAGTCATTGGTCTATTACCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCACCCAATGCAAAATCCAGCCCCAATgatgttcaagaagcaGAGGTGTGGACACTCTGCAGGATATTCAAACGCATCCCATCTTTCAAGAAGTACGCTCCAAACTTGAAAGACTCAACACCAGCCACCAAACCAAACCCTGTGAATTCCAACGCATCCACCTTAGATTCTGACAATTGCTGCAAGCCATATTTGATTTGCAGAGACCCTATGATGATGCAACAAATAGAAAGAAAACCAGTTATTGGACAAGTTGATGAAAAGAAACACTTGTTTTTGGGCCAATTTGGCCCACTATCCCATCTTCAGGCCCCATCAACCACCCCTTACCCAAATTTTTGGAACCAGAATAATGTTGAGGACCACGCATTTGCCAATGAGAATTGGGATGACCTAAGATCTGTGGTTCAGTTTGCAATCGATCCATCCACGGTGTTTGATTGTACCGAAACATATATTCCACCCTACTTTTCTTAG 915 0.4295 MNVKVHSSDDTKKDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSSPNDVQEAEVWTLCRIFKRIPSFKKYAPNLKDSTPATKPNPVNSNASTLDSDNCCKPYLICRDPMMMQQIERKPVIGQVDEKKHLFLGQFGPLSHLQAPSTTPYPNFWNQNNVEDHAFANENWDDLRSVVQFAIDPSTVFDCTETYIPPYFS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00998 304 MobiDBLite consensus disorder prediction 185 200 - -
Gma18g00998 304 PANTHER - 3 296 - -
Gma18g00998 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 296 - -
Gma18g00998 304 ProSiteProfiles NAC domain profile. 18 171 IPR003441 GO:0003677|GO:0006355
Gma18g00998 304 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Gma18g00998 304 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
Gma18g00998 304 MobiDBLite consensus disorder prediction 181 200 - -
Gma18g00998 304 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00998 Gma-Chr18 12958990 12965020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00998 8 171 NAC Transcription Factor Family AT5G39820 57.377 2.50e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma18g00998 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00998 - - gmx:100819795 650.203