Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00993 ATGGCTTCTGCTAGTGGAAATGGTGTCTCTAATGGCTCTGGCTCTCCTTGCGGGGCATGCAAGTTCCTTAGAAGAAGGTGTGCTGCTGATTGTATCTTTGCACCTTACTTTTGTTCAGAACAGGGCCCTGCTCGATTTGCAGCCATACACAAGGTCTTTGGTGCCAGCAACATTTCAAAGTTGCTTTTGCACATACCAACTCATGATTGTTGTGAAGCGGTTGTCACAATCACTTATGAGGCTCAGGCTCGTATTAGAGACCCTGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGATGCAAGACGATGGCAACTTGGTGCTAAAAGCGTGTCAATGGTCAGACCCTGCATACTGGTACACTTCAACCACGACCCGCAATGTGAATTTGGAGTTTAATGCTACCAGTGCTCTCTTGCACCTTGTTAGCGGCTCTAAGAACTCCTACCCCTTAACCAAGAACACTTCAACCCCCATGGAAGATTACTATCACCGCGCTACAATATATGGGAAAGGCAATTTCCATCAATATGCATATCACAGAAAGAACGGCACCGGGTGGAGGAGGGTTTGGAAAGCTGTGGAAGATCCCTGCAGACTGAATCTTGTTTGTGGTGTTTATGGCTTGTGCACTTGTAAGATTTGTGAAAATGAACCCACTTTTTATTGA 678 0.4572 MASASGNGVSNGSGSPCGACKFLRRRCAADCIFAPYFCSEQGPARFAAIHKVFGASNISKLLLHIPTHDCCEAVVTITYEAQARIRDPVYGCVSHIFALQQQMQDDGNLVLKACQWSDPAYWYTSTTTRNVNLEFNATSALLHLVSGSKNSYPLTKNTSTPMEDYYHRATIYGKGNFHQYAYHRKNGTGWRRVWKAVEDPCRLNLVCGVYGLCTCKICENEPTFY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00993 225 Pfam Lateral organ boundaries (LOB) domain 16 105 IPR004883 -
Gma18g00993 225 Gene3D - 94 199 IPR036426 -
Gma18g00993 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 105 - -
Gma18g00993 225 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Gma18g00993 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00993 Gma-Chr18 12858674 12861436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00993 1 103 AS2 family AT2G42430 82.524 3.19e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma18g00993 LOB 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00993 K13944 - gmx:100775977 478.789