Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00963 ATGTTGCCTCATTTTCTCATTACAAGATTAACTTCATCCTTCACACACTACAAGAGCACCCAAATCCCATTGGGTTCTCTGCTGCAACACAGACACTATGTTTTTCTTTTTTCCTTCAATTCATTCACATCTGGTAGAGACAACCATAAAGGTGTCACCTTTACCGTATCTTACCTCATAAACTCATGTGGGTTGTCCCCAGAACTGGCTTACAAACTCTCCAACGGGGTCAGTTTAAAAACCCCCAATGGCCCAAATGCTGTTCTTGACACTCTCAAGGACTATGGATTCTCCAAAACTGAGGTTGCAAAACTTGTGGAGAAGCATCCCAGGGTGCTTGTTGCAAATGCAGAGAAGACCCTTTTGCCTAAACTGCAGTTCTTCCACTCTATTGGGGTTTCCAACACTGACATGTCTAAGATGATAATTAAAAACCCCTTAATCTTGCGGAGGAGCCTGGCAAAATTCCTTGTCCCTCTATGCAGGATGATCAGGCGTGTGGTTCATGATGATCTGGAAGTTGTTAAAGTTTTGAGAAAATCCCCATTTGCTTTCACATATGCTGACATGGTGAATGGCTTGGTTCCAAACATTGAGGTTTTGAGGCAGTCTGGTGTGCCTCAAGGTTCGATCTCTCTGCTGATGGTCCATTTTCCCAGTGTAGCATATGGGAAGCATTCCAGATTTGTGGAAGCTGTCAAGAGAGTTAAGAAATTTGGGTTTGATCCTTTGAAAACAGCATTTGTCATGGCTATCCAAGTGCTTTATAATATGCGAAAACTGGCATTGGAATTGAGATTTGAGATTTATGAGAGGTGGGGCTGGAACCGGGAAATGGCTCTTCAAGCGTTTGTGAAGTATCCCAATTTTATCAAGTTGTCTGATGAGATGGTTACAAAGAAAATGAATTTCCTAGTGAAAGACATGGGTTTGTCACCAGAATATATTGCTGCATATCCTACTGTTCTAGGCTACAACTTGGAGAAGAGGATTGTCCCTAGACTCTCAGTAATTAAAATCTTGAAATCAAAAGTCAAATCAAATTGCACTTGGTGCTACCATTAG 1065 0.4169 MLPHFLITRLTSSFTHYKSTQIPLGSLLQHRHYVFLFSFNSFTSGRDNHKGVTFTVSYLINSCGLSPELAYKLSNGVSLKTPNGPNAVLDTLKDYGFSKTEVAKLVEKHPRVLVANAEKTLLPKLQFFHSIGVSNTDMSKMIIKNPLILRRSLAKFLVPLCRMIRRVVHDDLEVVKVLRKSPFAFTYADMVNGLVPNIEVLRQSGVPQGSISLLMVHFPSVAYGKHSRFVEAVKRVKKFGFDPLKTAFVMAIQVLYNMRKLALELRFEIYERWGWNREMALQAFVKYPNFIKLSDEMVTKKMNFLVKDMGLSPEYIAAYPTVLGYNLEKRIVPRLSVIKILKSKVKSNCTWCYH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00963 354 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 25 344 - -
Gma18g00963 354 PANTHER CGI-12 PROTEIN-RELATED 25 344 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 Pfam mTERF 273 344 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 Pfam mTERF 89 299 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 Gene3D Transcription termination factor 3, mitochondrial 162 351 IPR038538 -
Gma18g00963 354 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 SMART mt_12 139 171 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Gma18g00963 354 SMART mt_12 175 207 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00963 Gma-Chr18 11973966 11975514 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma18g00963 mTERF 6.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00963 K15032 - gmx:100813396 683.33