Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00962 ATGAAGCTTTGGTCCACCAATGAGGTTCGCGCCAAGTCCAAGTTCTGGTATTTTCTGAGGAAATTGAAAAAGGAGAAGAAGAGCAACGACCAAGTGCTTGCTATCAACCAAGACACAATCAAAATGGCCTTTTGTAATAAGGTTGGAAATGTCTCGAGGCAGAGTGTTGCTCACAGCACACAAGCACCTGTTTCATCCATGCTTAATTATATTCGCTGCATGTCTTCAAGCAAGCTTTTCAATGGAGGCCTTTCATATGGAGTTGATGATCAGTCTCTTAAGGATGCATTTTCTGGCTTTGGAGATGTGGTAGATGATCCTAATGATGGTGAAATCTTGATGCAATATGCGAAGTTGGTGTGGGAGAACCATCACGACAAGGATAGAGCAATGGCATATTTTGATGCACTCGAGGGAGAGGAACCATTGGCTTTGGACCTTGAAAGCATGGGTAAGGGACAAGTATCACGTTCGAAGGTCCTGGCTGAAGCCAATGAAGAACTTGATAGTAGTGTTTGA 519 0.4355 MKLWSTNEVRAKSKFWYFLRKLKKEKKSNDQVLAINQDTIKMAFCNKVGNVSRQSVAHSTQAPVSSMLNYIRCMSSSKLFNGGLSYGVDDQSLKDAFSGFGDVVDDPNDGEILMQYAKLVWENHHDKDRAMAYFDALEGEEPLALDLESMGKGQVSRSKVLAEANEELDSSV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00962 172 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 95 - -
Gma18g00962 172 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 1 37 IPR023573 GO:0003735|GO:0005840|GO:0006412
Gma18g00962 172 PANTHER 60S RIBOSOMAL PROTEIN L18A 1 95 IPR028877 -
Gma18g00962 172 SUPERFAMILY RNA-binding domain, RBD 72 135 IPR035979 GO:0003676
Gma18g00962 172 Gene3D - 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00962 Gma-Chr18 11964162 11967022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00962 1 37 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 86.486 1.34e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00962 - - gmx:100800228 164.466