Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00959 ATGGTGTGGCTTGCAAATTGGGTCATGAACCAAGTGCTTGTTAAATCATGTTATGGATTTGCAAGAAAACTTAAAAGCCATGGGTTTCATTGGGGTGATCTTTCATCCAAACCATTGCATCAACCTTCCCCTTTCCCTAATATTGACAAGTGTGATTTGGAGTGTAGAGGGTCACAAACCCTAGCTTGTGACTTTCACAAAGTCCTCTTAAGGACTCATTCCTTCTTTCCCTATTTCATGCTTGTTGCCTTTGAAGGTGGAAGCATTTTTAGGGCATTCTTCTTGCTTTGTTCATGCCCTATGCTGTGGATCTTAAACTATGAAATGAAGCTTAGGGTCATGATCTTCATCTCCTTTTGTGGCCTCAGAATGAAGGACATGGAAAACACTTCAAGGGCAGTTTTGCCGAAGTTCTACTTGGAGAACCTCAACCTTGAGGCCTATGAGGTAGTGGCTTCAGTAGGGTCCAGAGTTTTCTTCACCACTATGCCTAAAGTGATGGTTGAAGGGTTTCTCAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAATTGCACACTTCTGGTTGTTACTTCACTGGTTTGCTCTCTAAGTCTGGTTTGCTTGTGAAGCATAGTGCCCTCATGGACTATTTTGGAGATACAAAGCCTGACCTTGGGATTGGCAACACAAGTCTTCATGATCAGCTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATCAATGAAGAGGGCAAAGTGATGCCAAGAAACAAATATCCAAAGCCCTTAATATTTCATGATGGAAGGCTAGCATTTTTGCCTACTCCTTCCGCAACCCTTCTTATGTTCATGTGGCTTCCCCTTGGATTTCTGATGGCCATTTACAGAATTTTTCTGGGGGTTTTCCTTTGTTGCAAATTTACATTGGCGTTAGGAATATGGAGTGGACTAATTCTGAATTTCAATGACAAGAACCAACAAAGATCAGAGTCAAACAAAGGGGTGCTCTATGTGTGTAGCCACAGGACTCTCATGGATCCAATTTTTCTTAGCATAACGCTGGGGAGGCGTTTGACTGCTGTCACATACAGCTTAAGCAAGGTGTCTGAATTGATAGCCCCTATTAGGACAATGAGACTCACAAGGGACAGAGAACAAGACGGGGAAACTATGAAAAGGTTGCTTTGTGAAGGGGATTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCATATTTACTAAGGTTCAGTTCTTTGTTTGCTGAACTTGCTGATGAGATTGTGCCTGTGGCTATGAATGCTCATGTGACCATGTTCTATGGGACCACAGCCAGTGGACTAAAGGTCTTGGACCCTATTTTCTTCTTCATGAACCCTTGGCCAAGATATGACATTCAAGTCCTTGGAAAGGTTCCTAGAGAACTCACATGTGCTGGAGGTAGGTCTAGTCATGAAGTGGCAAATTACATACAGAGGCAGTTGGCTGATGCTTTAGGGTTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGCAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTCTGCTAA 1584 0.4306 MVWLANWVMNQVLVKSCYGFARKLKSHGFHWGDLSSKPLHQPSPFPNIDKCDLECRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFFLLCSCPMLWILNYEMKLRVMIFISFCGLRMKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPKVMVEGFLKEYLNADAVIATELHTSGCYFTGLLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVVINEEGKVMPRNKYPKPLIFHDGRLAFLPTPSATLLMFMWLPLGFLMAIYRIFLGVFLCCKFTLALGIWSGLILNFNDKNQQRSESNKGVLYVCSHRTLMDPIFLSITLGRRLTAVTYSLSKVSELIAPIRTMRLTRDREQDGETMKRLLCEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMNAHVTMFYGTTASGLKVLDPIFFFMNPWPRYDIQVLGKVPRELTCAGGRSSHEVANYIQRQLADALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRFC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00959 527 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 14 521 - -
Gma18g00959 527 SMART plsc_2 331 432 IPR002123 GO:0016746
Gma18g00959 527 Pfam Acyltransferase 318 424 IPR002123 GO:0016746
Gma18g00959 527 PANTHER ANCIENT UBIQUITOUS PROTEIN 14 521 - -
Gma18g00959 527 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 253 519 - -
Gma18g00959 527 CDD LPLAT 307 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00959 Gma-Chr18 11902947 11906143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00959 1 519 Acyl Lipid Metabolism Gene Families AT1G06520 54.922 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00959 18 11902947 11906143 Gma08g02907 08 45384174 45386892 GST
Gma18g00959 18 11902947 11906143 Gma02g02755 02 53185354 53187654 PCT