Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00956 ATGCAGCAAGATCACAGGAAAAAGAGTTCAGCTGAGATGGACTTTTTCTCCGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCACACAGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATATATCTGATGCTGCTCGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCTCCGTCAAGGAAGGACTTTAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACACTATCAGTTTTTTCTTTACCAATTACTTCGAGCACTGAAGTACATTCACACGGCAAATGTCTATCATCGAGATTTGAAGCCAAAGAATATACTTGCTAATGCGAACTGTAAGCTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAACTATGTGGATCATTTTACTCTAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTTCATCAATTGGATCTGATGACAGATCTGCTTGGAACTCCTTCACTAGATACTATATCTCGGGTACGTAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCATTTGCTCAAAAATTTCCCAATGCAGACCCTTTAGCACTAAGGCTACTGGAAAAGTTGTTGGCTTTTGATCCAAAAAACCGACCTACTGCTGAAGAGGCTTTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCCTGCCAACCTATCACGAAAATGGAATTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATTCGAGAGCTGATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCCGAAAGCAGTTTGCTCATCTTGAGGAAAATGGTAAAAATGGCCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACAGTACACCCAAAAGAGCAAACAAATATTGCTTCCAGCAAAAACCGACCAACAGCCGAGGAATATAACAAGCACCCCAGGGATACAGAAATTCCAGTGCCTAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCTGGAAAAGTTGTTGGGCCCGTTGTTCCTTACGAGTACGGTAACATTGTCAAGGATTCATATGATCCTAGGTCATTTATCAGAGGTTCTGTGCTTCCTACACAACCTGTTCCCCCAGCATATTATTATCAAAGATCCAGCACTGGAAACCAAGAAAGGCCATCAACAGAAGCTGACAAGAGTGTGCCTTTGCAGGCAAAACATGCACAACAATGTGGAGTTAATGCCAAGATGGCACCAGATATAGCTATTAATATTGATACAAATCCCTTTTTTATGACCAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGCCATAGAGACAAACATGCTGCAGCCAAAGGCACATCAATATGGTGGAATCAGTGCTGCAGCTGGGGCCACTGCTCATAGAAAAGTTGGTCCTGTTCAGTATGGTATGACAAGAATGTTTTAG 1845 0.4076 MQQDHRKKSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLEKLLAFDPKNRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTVHPKEQTNIASSKNRPTAEEYNKHPRDTEIPVPRSMQGPQRIPLAKPGKVVGPVVPYEYGNIVKDSYDPRSFIRGSVLPTQPVPPAYYYQRSSTGNQERPSTEADKSVPLQAKHAQQCGVNAKMAPDIAINIDTNPFFMTRAGVNKLEQGDQIAIETNMLQPKAHQYGGISAAAGATAHRKVGPVQYGMTRMF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00956 614 MobiDBLite consensus disorder prediction 504 527 - -
Gma18g00956 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00956 614 MobiDBLite consensus disorder prediction 507 525 - -
Gma18g00956 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma18g00956 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00956 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gma18g00956 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gma18g00956 614 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Gma18g00956 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Gma18g00956 614 MobiDBLite consensus disorder prediction 428 465 - -
Gma18g00956 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Gma18g00956 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00956 614 CDD STKc_TDY_MAPK 24 361 - -
Gma18g00956 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00956 Gma-Chr18 11812061 11818679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00956 1 435 MAP Kinase Gene Family AT2G42880 88.532 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma18g00956 Pkinase 3.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00956 - - gmx:100811788 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00956 18 11812061 11818679 Gma08g02910 08 45444480 45451807 GST
Gma18g00956 18 11812061 11818679 Gma14g00245 14 2082830 2088692 PCT
Gma18g00956 18 11812061 11818679 Gma02g02694 02 52706804 52713355 PCT
Gma14g00245 14 2082830 2088692 Gma18g00956 18 11812061 11818679 PCT
Gma02g02694 02 52706804 52713355 Gma18g00956 18 11812061 11818679 PCT