Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00939 ATGCACGTTGTTAAGATCAATACGTTCCGAGGAAATGATGCAGATAGCAGGGCTGCAAATGAAGGAGACAACACAAATGAGGGGATCAGAACATTGGTGAAAGAGTTGAGGGAAGCATCTTTTCGCATAGAAGATGTCATTGATGAATACTTGATCTATGTGGAACAACAGCCTGATGCTCTTGGATGTGCAGCTTTGCTCTGTCAGATTATTCACTTCATTGAAACTTTGATGCCTCGTCACCGAATTGCATCAGAGATTCAGCAGATTAAGACAGTTGTTGATGGAATCATGCAAAGAGTTCAAAATTATAACTCCCTAAATCAACTTTTTTCTAAACAAGGACAAAGCAGTCATGGAGGTGTCCAACGTCATCAGCCTCGATCAAATCCACGTTTCCTTGAAGATGCTGAAGTTGTTGGCTTTGAAGACACCAAAGATGAATTGATTGGGTGGTTAGTAGAGGGACCAGCAGAGCGCATTgtcatctctgtggtcggaatgggagggttaggaaaaacaactcttgttggcagagttttcaacaaccagaaggtgactgcacactttgattctcatgcatggatcactgtgtcTCAATCCTACACCTTGGAAAAGTTGATGAGAGACTTGTTGAAGAATTTATGCAAAGAAGAAAAGAAGGAGCCTCCTCGAGATGTTTCTGAAATGGATCAAGATTCATTCATTGATGAAGTGAGAAACCATTTGCAGCAAAAGAGGTACATTGTTATTTTTGATGATGTGTGGAGTGTAGAACTTTGGGGTCAGATTAAAAATGCCATGCTTGATAATAACAATGGAAGTAGAATAGTGATAACAACAAGGAGCATGGATGTTGTAAACTCTTGTATGAATTCTCCTTCAGATAAGGTGCATGAGCTGAAACCTTTAACTTTTGAAAAATCTATGGACCTGTTTTGCAAGAAGGCATTCCAACGTCACAACAATGGAGGTTGTCCAGAAGATCTAGAGGATATATCTTCTGACTTTGTTGAAAAATGTAAGGGTTTGCCATTAGCAATTGTAGCTATTGGTAGTCTTTTAAAAGACAAAGAAAAGACTCCATTTGAATGGGAAAAAGTTAGGCTAAGTCTGAGTTCAGAGATGAAGAAAAATCCCCATTTAATTGGTAAAGTTACCTACAAATATGTGGAAAGAATCCCTATAAAATACAGGCTATTGAAGATACTTGATTTTGAAGATTGTCCAATGGATTTTGTTCCTAAAACATGGGGAAATCTAGCACACTTGAAGTACTTAAGCTTAAGGCGTTGCATTGGAGCTGAAGTTCTTGTGAAATTCATTAGTAAGTTGCAGAACCTCGAGACCTTGGACATAAGGAACGCAAAGCTTGGGGAAATGTCAAAGGAGATTTGCAAGCTCACAAAGCTACGACATCTTTTGGTTAAGAATGTGAAGTTGTTTGAATTGAAGAATGGTCTTGGAGGCATGACATCCCTACAAACATTGTGTCAATTAAGTGTAGGTTATAATGAAGATGATGATGTAGTAGAGTTGTTGAAAGAACTAGGAAAGTTGAAGCAGTTAAGGAGCTTAGGCTTAATTGACCTTAAGGAAGGATTAGGAACTGCTCTATGTTCAACAATAAATGAGTTGCCAAACTTGGAGAAACTACATATTCAGTCAGATTGGGATTTTGATTTCAATGTTATTGATTTGCCTCTTATTTCATCTCTTGCTATGTTGAGGAAGCTTAAACTAAGTGGGAGGTTAAATAAGTTTCCAGAGTGGGTCCCACAACTCCAAAATCTTGTAAAATTGTCTTTGTTACGCTCCCGGTTAACTGATGATCCATTGAAATCACTACAAAATATGCCTCATTTGTTGTTTCTATACTTTGGCTACTGTGCTTATGAAGAATACACCTCGAGACAGTACCTCATGGTATCCAACACTTGGAAAAACTTCAAGTTCTCAACGCTTATGTTTTGCCAGATAAATTCATGGAATGCGTTGCTCCCGATGGAGGACCAGAGCACCCAAGCATCCAACATGTGCCCCTTGTTAGAATTACTTCCTATGGAAAAACAACACGCATTATTCATCACTGAAATTCAAGGCATTAGAATTCATAAAAAGGAATTGGGCTTCTTCCAGTGCTTTCAAAATTAG 2154 0.3626 MHVVKINTFRGNDADSRAANEGDNTNEGIRTLVKELREASFRIEDVIDEYLIYVEQQPDALGCAALLCQIIHFIETLMPRHRIASEIQQIKTVVDGIMQRVQNYNSLNQLFSKQGQSSHGGVQRHQPRSNPRFLEDAEVVGFEDTKDELIGWLVEGPAERIVISVVGMGGLGKTTLVGRVFNNQKVTAHFDSHAWITVSQSYTLEKLMRDLLKNLCKEEKKEPPRDVSEMDQDSFIDEVRNHLQQKRYIVIFDDVWSVELWGQIKNAMLDNNNGSRIVITTRSMDVVNSCMNSPSDKVHELKPLTFEKSMDLFCKKAFQRHNNGGCPEDLEDISSDFVEKCKGLPLAIVAIGSLLKDKEKTPFEWEKVRLSLSSEMKKNPHLIGKVTYKYVERIPIKYRLLKILDFEDCPMDFVPKTWGNLAHLKYLSLRRCIGAEVLVKFISKLQNLETLDIRNAKLGEMSKEICKLTKLRHLLVKNVKLFELKNGLGGMTSLQTLCQLSVGYNEDDDVVELLKELGKLKQLRSLGLIDLKEGLGTALCSTINELPNLEKLHIQSDWDFDFNVIDLPLISSLAMLRKLKLSGRLNKFPEWVPQLQNLVKLSLLRSRLTDDPLKSLQNMPHLLFLYFGYCAYEEYTSRQYLMVSNTWKNFKFSTLMFCQINSWNALLPMEDQSTQASNMCPLLELLPMEKQHALFITEIQGIRIHKKELGFFQCFQN 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00939 717 PANTHER - 400 627 - -
Gma18g00939 717 Pfam Rx N-terminal domain 18 58 IPR041118 -
Gma18g00939 717 Gene3D Ribonuclease Inhibitor 388 685 IPR032675 -
Gma18g00939 717 PANTHER - 21 373 - -
Gma18g00939 717 Gene3D - 304 387 IPR042197 -
Gma18g00939 717 PANTHER DISEASE RESISTANCE PROTEIN RP 21 373 IPR044974 GO:0006952
Gma18g00939 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 389 IPR027417 -
Gma18g00939 717 CDD RX-CC_like 13 97 IPR038005 -
Gma18g00939 717 PANTHER DISEASE RESISTANCE PROTEIN RP 400 627 IPR044974 GO:0006952
Gma18g00939 717 Gene3D - 127 296 IPR027417 -
Gma18g00939 717 SUPERFAMILY RNI-like 391 665 - -
Gma18g00939 717 Pfam NB-ARC domain 143 387 IPR002182 GO:0043531
Gma18g00939 717 PRINTS Disease resistance protein signature 443 459 - -
Gma18g00939 717 PRINTS Disease resistance protein signature 242 256 - -
Gma18g00939 717 PRINTS Disease resistance protein signature 162 177 - -
Gma18g00939 717 PRINTS Disease resistance protein signature 341 355 - -
Gma18g00939 717 Gene3D - 7 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00939 Gma-Chr18 11529643 11533641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00939 157 362 WRKY Transcription Factor Family AT5G45050 24.757 8.03e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00939 K13457 - gmx:102659491 619.387