Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00927 ATGGTGACCATAAAAGCTTCTCACACTGTGGCTCCAAATCAACCAACACCCCAAGGTCGATTATGGCTATCTAATAGTGACCAAACCGCACGCCCGGCCCACACACCAAACCTTTACATCTACAAAGCAAAACACAACATCATCGAATATGACATTGAGAAAATGATAGACTCTCTTAGCAAAGTTCTAGTGTACTACTATCCAGTAGCTGGCAGATTGAGCGTAACAGAAAGTGGTCGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATCGAAGCCGAAACCGCAAAAACATTTGATGATTTTGGAGACTTCACACCCTCAGACTCCATCAAGGAAGAACTTGTTCCAGTGATTGATTATCACTCTCAACCTATAGAAGAGATTCCTTTGGTATTAGTCCAAGTAACAAGATTCAAAGGTGACCGAAAACAACAAGGCCTTGCCGTTGCAGTGGCTGTTTCTCATCCTGTGGCTGATGGGTATGCTTGGATTCACTTCATCAACACATGGGCAAAGGTTAATAGAGGAGGCATGTTAGATCTTAATGACATGCCATGTCTAGATAGAACTATACGCAGATCATCGTCGTTGTCATCACCGCCACCGCGCTTCGATCACCCTGAATTGAAGCCTCTACCATTTAAACTAGGCAAATCTGACAGCACTGAAGAGCAAAATAAGAAGACAACAGCTGCTGTATTAAAACTCACATCAGAACAAGTGGAGATGTTGAGGAAGAAGGCTAATGAAAATGAAAACCTATCAACAAAGCAAGGGTCAAGATCAAGACCTTGTAGCAGATTTGAAGCTGTGGCTGCACACATATGGAGATGTGCATGCAAGGCTCGTGAACTAGATCGCAATCAACCAACTCTTGTTCGGTTCAACGCCGATTTTCGCAATAGACTAACCCCTCCTCTCCCGAGAAATTATTTTGGGAATGCATTGGCGGCGACAGTGACACCAGAATGTTATGCTGGAGAAATCACATCGAAACCGTTGAGCTATGCCGCCCGGAAAATGAGAGAAGCGGTTGAAATGCTCAAGGAAGAATATATAAGTTCACAGTTAGATATTGCGTTGGGTGAGGAGCAATTGGAGTCCATAAAGGCTTTGTTCTCGAGACAAGGAGAGCGTAGGAATGCCCCTTTTGCAGGGAACCCTAACCTTCAAATCACGAGCTGGATAAACATTCCACTGTATGAAGCAGATTTTGGCTGGGGAAAGCCTGAGCATTTTGTTCTGGGATATGTGTGTCCGTTTGACAGGGGGATTATTATTCAAGGTCCAGAAAATGATGGTTCTGTCATTGTCATCATGTATTTCCAGATATCACATATGCAACTCTTTAAGAAATTCTTCTACGAGGATGTATTCACTTCAAGGTTGTAA 1401 0.4347 MVTIKASHTVAPNQPTPQGRLWLSNSDQTARPAHTPNLYIYKAKHNIIEYDIEKMIDSLSKVLVYYYPVAGRLSVTESGRMEVDCNAKGVTLIEAETAKTFDDFGDFTPSDSIKEELVPVIDYHSQPIEEIPLVLVQVTRFKGDRKQQGLAVAVAVSHPVADGYAWIHFINTWAKVNRGGMLDLNDMPCLDRTIRRSSSLSSPPPRFDHPELKPLPFKLGKSDSTEEQNKKTTAAVLKLTSEQVEMLRKKANENENLSTKQGSRSRPCSRFEAVAAHIWRCACKARELDRNQPTLVRFNADFRNRLTPPLPRNYFGNALAATVTPECYAGEITSKPLSYAARKMREAVEMLKEEYISSQLDIALGEEQLESIKALFSRQGERRNAPFAGNPNLQITSWINIPLYEADFGWGKPEHFVLGYVCPFDRGIIIQGPENDGSVIVIMYFQISHMQLFKKFFYEDVFTSRL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00927 466 Pfam Transferase family 1 459 - -
Gma18g00927 466 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 461 - -
Gma18g00927 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 461 - -
Gma18g00927 466 Coils Coil 237 257 - -
Gma18g00927 466 Gene3D - 1 214 IPR023213 -
Gma18g00927 466 Gene3D - 220 460 IPR023213 -
Gma18g00927 466 MobiDBLite consensus disorder prediction 1 28 - -
Gma18g00927 466 MobiDBLite consensus disorder prediction 195 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00927 Gma-Chr18 11197790 11199334 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00927 2 459 Monolignol Biosynthesis Gene Families AT5G48930 37.336 4.63e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00927 K13065 - gmx:100788434 934.865