Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00906 ATGGTTTGCATTAAGACTACTGGAAATAAGAAGAAAAGGGGCGGTGGTTTTCAACCCTCCACCACTGAAATTCCCCATGCTTTTGGAACACCCCAATCTACCACTAATATGGGTCCGCCCCCTGTGGATAACAGTGCTACTCACCAAAGGGATTGTGTTTCAACCATGGTTGGAGAGGCTAGTGAATTAACTTCCAACTTGGTAGTTACTCCTATTCCCCCTAGAATTAAATGCATTAGCGAGAGCATTCGAGGAGTTAGATCAATTTGTAGCCCCCAACATATGGATCAACTAAGATCTTTGTGCCTTTCCCAAGATGGGGATGACGAAATTTGGATTTTAACACTTCCCAATCCAAATGACCGTATTTGTTCTCAAGGACCAAGAAATGAAGATGTTGGTCAACCTGCTAATGAAAACATATTGGATTCTAACTACTACAACTCATCAAATGAATCTTGCAACTCATCAAGCAATGAGAACTATGCTTTGTCAAAGTGGTGCTTGGAGGAACTCAATAGGATTCTAGACAGCAAGAGACACCAAGGAAAGATTGTGATACTTGTGTTTTACAACATAGATCCATCGGATATGAGGAAGCAAAAAGGAAGCCATGTGAAAGCATTTGCAAAACATAACGGAGAACCTAAGAATGAATCTGAATTCCTTAAGGACATTGTTGGAGATGTGTTGCAAAAATTACCTCCTAAATACCCAATTAAACTTAGAGGACTTGTTGGAATTGAGGAAAAGTATGAACAAATTGAATCATTATTAAAACTTGGGTCAAGTGAGGTTAGAACCCTTGCAATATGGGGCATGGGTGGAATAGGTAAAACGACCCTTGCTTCGGCTTTATATGTCAAGTTGTCTCATGAGTTTGAAAGTGGTTACTTCCTTGAAAATGTAAGGGAAGAATCAAACAAGCTTGGACTCAAATTTATGTAA 948 0.3956 MVCIKTTGNKKKRGGGFQPSTTEIPHAFGTPQSTTNMGPPPVDNSATHQRDCVSTMVGEASELTSNLVVTPIPPRIKCISESIRGVRSICSPQHMDQLRSLCLSQDGDDEIWILTLPNPNDRICSQGPRNEDVGQPANENILDSNYYNSSNESCNSSSNENYALSKWCLEELNRILDSKRHQGKIVILVFYNIDPSDMRKQKGSHVKAFAKHNGEPKNESEFLKDIVGDVLQKLPPKYPIKLRGLVGIEEKYEQIESLLKLGSSEVRTLAIWGMGGIGKTTLASALYVKLSHEFESGYFLENVREESNKLGLKFM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00906 315 Gene3D - 235 314 IPR027417 -
Gma18g00906 315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 216 312 IPR044974 GO:0006952
Gma18g00906 315 MobiDBLite consensus disorder prediction 23 48 - -
Gma18g00906 315 Pfam TIR domain 160 218 IPR000157 GO:0007165
Gma18g00906 315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 160 215 IPR044974 GO:0006952
Gma18g00906 315 MobiDBLite consensus disorder prediction 1 48 - -
Gma18g00906 315 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 216 312 - -
Gma18g00906 315 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 160 215 - -
Gma18g00906 315 SUPERFAMILY Toll/Interleukin receptor TIR domain 160 225 IPR035897 -
Gma18g00906 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 312 IPR027417 -
Gma18g00906 315 Gene3D - 156 234 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00906 Gma-Chr18 10681326 10684778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00906 172 306 WRKY Transcription Factor Family AT4G12020 28.758 1.76e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00906 - - gmx:100813283 211.846