Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00889 ATGACCTCATTTGATGTGAGGTTTGCACTGAGAGTAGATGAAGGTTTCCATCCAAAACTTGCTGATTTTGGGCTTGCAAAATTTGGTCCAACCGGAGAACAATCGTATGTTGCCACTAGGGTCATGAGAACACAAGGTTATTGTGCCCCTAAATATGCCACTAGTGGAAATTTAACGATGAGATCTGACATTTACAGTTTTGGGGTTGTGTTATTGGAACTAATTACTGGACGCAGAGCATATGATGATAATGGTGGCAACATGCAACATACGTCTGAAGTTCTGTTTCGATCTTTAGATTTGGTTTTCTCTATTTGA 318 0.3994 MTSFDVRFALRVDEGFHPKLADFGLAKFGPTGEQSYVATRVMRTQGYCAPKYATSGNLTMRSDIYSFGVVLLELITGRRAYDDNGGNMQHTSEVLFRSLDLVFSI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00889 105 Gene3D Transferase(Phosphotransferase) domain 1 10 101 - -
Gma18g00889 105 PANTHER OS07G0668900 PROTEIN 12 84 - -
Gma18g00889 105 SUPERFAMILY Protein kinase-like (PK-like) 12 85 IPR011009 -
Gma18g00889 105 PANTHER OS07G0668900 PROTEIN 12 84 - -
Gma18g00889 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00889 105 Pfam Protein kinase domain 17 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00889 Gma-Chr18 10397042 10397571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00889 12 82 Glycoside Hydrolase AT3G07070 63.380 8.36e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma18g00889 Pkinase 2.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00889 K13430 - gmx:100809298 150.984