Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00834 ATGACCAAGTGGTTTTATGGGATAATGGGAGCAACAACATGGTGTAAGGAAGTTTTTTCTATGAGGGTTTTGGCTGGCAGTGGCGGTTATGCAGTTGATCTTTTCATAAAAGTTGTCATTGCTGAATTTACTTGCATTCTGGCACTAGGAGGGTCCATAGTGGGGATAATTGCAGGAGCTATCAAAGGCCATACCAGAGGAGCTGGTTTTCTTGATGGAGCTTGCAAAGGAGCTGTCACAGGGGCCATTGCAGCACTAGAATTGCTAAATATTGCTGCTTATGATGAGCCACTGTCTAAGGTAGCCCTATTGAGGAGTTTATTAAATGGAAAGCTATTTATGGAATGGATATGTCCAGCTGTTGCACAAGCCTATCATTGTCATATCAGTGCACATGCAACAACTTACAGAGAAGAATCAGATATTTACAATGACAATATTGTCAGGGAAATCACAGTCGAAGGGGTGGCTTGGAATATCATTCAAAAGCTTCCTGTTCAACAATTCAATTCCAGTAAAATGTTCAAATTATACAATGACCCTTGCTGCTCAATATGTTTCCAGGATTTTGAGGATGAAGAATTTGTGAGGACACTTCCAAAATGTGGCCACTTTTTTCACTTAGTCTGCATAGACAAATGGCTAGTCCAACAAGGATCATGCCCCATGTGTAGAATTTATGTTCCAGATTTATGA 696 0.4052 MTKWFYGIMGATTWCKEVFSMRVLAGSGGYAVDLFIKVVIAEFTCILALGGSIVGIIAGAIKGHTRGAGFLDGACKGAVTGAIAALELLNIAAYDEPLSKVALLRSLLNGKLFMEWICPAVAQAYHCHISAHATTYREESDIYNDNIVREITVEGVAWNIIQKLPVQQFNSSKMFKLYNDPCCSICFQDFEDEEFVRTLPKCGHFFHLVCIDKWLVQQGSCPMCRIYVPDL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00834 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 230 IPR013083 -
Gma18g00834 231 SMART ring_2 183 224 IPR001841 -
Gma18g00834 231 CDD RING-H2_PA-TM-RING 182 225 - -
Gma18g00834 231 Pfam Ring finger domain 183 225 IPR001841 -
Gma18g00834 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 228 - -
Gma18g00834 231 SUPERFAMILY RING/U-box 175 229 - -
Gma18g00834 231 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 8 228 IPR044523 -
Gma18g00834 231 ProSiteProfiles Zinc finger RING-type profile. 183 225 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00834 Gma-Chr18 9706774 9708771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00834 34 228 C3H Transcription Factor Family AT5G66070 33.824 8.92e-34 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00834 18 9706774 9708771 Gma18g00834 18 9706774 9708771 ECH
Gma18g00834 18 9706774 9708771 Gma08g02968 08 46191477 46193479 GST