Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00832 ATGGTTCTAATACTCAGTTTCGGAATGACGCAAATACGGTGGATGAATGTACAAGCACGGACTCGTCTTATAGACGTAGAATTTTGCCCTAACCAGCCCGTTCAACAAACTATAGATGATGTCATTTTTCACGTTCTGGATTCTTCCGTATCTTTATCTTGCATTCCCCTTCGCTCCGTGGGCCCCACTTTCCGCCCTGGAAATATTATTACCTGTTTGGATGCACTTTCCCTTATAATTCACCGAATCACCCACTCACACTTTCAAGTTGGCTCCACCATGCTCCGCGTTCAATGTACGCACACTTGCAGTCTCTCGAAGCCTCTTTCTCTCTCTTCTAGAAGCTATCTGTGTTTGGTGTTACTAAGTCTCCAACAAGCAAAGTACATGGTTGATTTGGAAATCCAGGTCCCCACCCCATTCGACCCGTTTGCCGAGGCGAGAGAATCGGATGCCCCCGGAGCAAAGGAGTATGTGCATATTCGAATTCAGCAGAGGAATGGGAAGAAGAGTCTGACCACAGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGAACCGTGGTGCAGGACAAGGAGCTTGGCAAGATCATCCAACTCCAAGGCGACCAGCatgtcatgcatggcgctaccatcactagcgccttcgaagggacgtggcacgtggtgctggtgtcgccattcccatcagcgcctccccttttgttgacgtggctttggaagcgccaacaacaatggcgagttgagcatgggcagttaaacgcaaagccctag 813 0.3875 MVLILSFGMTQIRWMNVQARTRLIDVEFCPNQPVQQTIDDVIFHVLDSSVSLSCIPLRSVGPTFRPGNIITCLDALSLIIHRITHSHFQVGSTMLRVQCTHTCSLSKPLSLSSRSYLCLVLLSLQQAKYMVDLEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGTVVQDKELGKIIQLQGDQHVMHGATITSAFEGTWHVVLVSPFPSAPPLLLTWLWKRQQQWRVEHGQLNAKP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00832 270 ProSiteProfiles Translation initiation factor SUI1 family profile. 159 217 IPR001950 GO:0003743|GO:0006413
Gma18g00832 270 Pfam Translation initiation factor SUI1 156 218 IPR001950 GO:0003743|GO:0006413
Gma18g00832 270 Gene3D - 123 227 - -
Gma18g00832 270 SUPERFAMILY eIF1-like 129 218 IPR036877 GO:0003743|GO:0006413
Gma18g00832 270 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 130 261 - -
Gma18g00832 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 130 261 - -
Gma18g00832 270 CDD eIF1_SUI1 157 217 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00832 Gma-Chr18 9649119 9658319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00832 130 218 Eukaryotic Initiation Factors Gene Family AT5G54940 83.146 2.78e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00832 K03113 - gmx:100787664 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00832 18 9649119 9658319 Gma18g00832 18 9649119 9658319 ECH
Gma18g00832 18 9649119 9658319 Gma08g02970 08 46212761 46214653 GST
Gma18g00832 18 9649119 9658319 Gma14g00202 14 1699568 1701162 PCT
Gma18g00832 18 9649119 9658319 Gma02g02738 02 53062247 53062591 PCT
Gma14g00202 14 1699568 1701162 Gma18g00832 18 9649119 9658319 PCT
Gma02g02738 02 53062247 53062591 Gma18g00832 18 9649119 9658319 PCT