Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00814 ATGTTGCTAAACATTCCTGTGGCATCATTGCAAGAAAAATTCCAAGGCAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCAACGTCTGAGATTCTGAACAGTATAAGAATTCTAAAACTGCAAGCATGGGAGATGAAGTTCCTATCAAAGATTATTCAGCTTAGGAAGACTGAGGAGACATGGCTAAAGAAATTTCTAGTTGGTACAGCAATTGTTAGATTTCTCTTCTATAACGCCCCAACTTTTATTGCTGTGGATACATTTGGTGCATGTGCTCTTATCGGAATCCCACTTGAATCAGGAAAGGTCTTATCAGCACTTGCAACATTCAGAATTCTTCAAATGCCCATATACAGTTTTCCTGACACCATTTCAATGATTGCACAAACTAAGGTTTCCCTTGAAAGGATTGCATCATTTCTTCGTCTAGATGAGTGGAAGACTGATGTAGTAGAGAAGCTTCCACAGGGTAGTTCTGATAAGGCAATTGAATTAGTAGATGGAAATTTCTCTTGGGATTTATCTTCCCCTTATCCAACATTGAAAAACGTAAATCTCACAGTTTTTCATGGTATGAGGGTTGCTGTATGTGGTAATGTTGGGTCAGGCAAGTCCAGTTTACTTTCTTGTATAATAGGGGAAGTACCAAAGATATCTGGGACCCTGAAGATATGTGGTACAAAGGCTTATGTTTCTGAATCACCATGGATACAGAGTGGCAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGATAGGGAAAAGTATGATGAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTACCATTTGGTGATCAGACCACTATCGAAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCCCGTGCTCTATACCAAGATTCTGATATATACCTGTATGATGATCCCTTCAGTGCATTGGATGCTCATACAGGATCCCATCTCTTTAAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATTTATATAACTCATCAAGTAGAGTTCTTATCCGATGCTGATCTAATAGTGGTCATGAGAGAAGGAAGAATAACTCAATCAGGAAAATACAATGACATTCTCAGGTCAGGCACTGATTTTATGGAACTTGTAGATGACATAGTTAAACCCAAAGGACAACTAGTTCAAGAAGAAGAACGGGAAAAGGGTAGAGTAGGGTTTAATGTCTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCATCATATTACTTTCAACGATACTCACTGTGGCTTTTCAGATTGCTAGCAATTATTGGATGATTTTGGCTACTCCTATCTCTGCAACTGCAGAACCTGATATTGGAAGCTTTAAACCTATGGTTGTCTATGTTGCTTTGTCAATTGGAAGTTCCATTTTCACCTTTGCCAAAGCATTTCTTGCTGTGATAGCTGGATACAAGACAACCACTGTGATCTTTAATAAAATGCATTTGTGCATTTTTCGAGCACCAATATCATATTTTGATGCCACCCCGAGTGGGCGAATCCTTAATAGAGGCTTAGTGATGATGGGTCACAAACTTCTCTTTCAACGCTTGGTGAAGACAAGGGATGCTGGTAAAGACCAAAGGGGGCGCTGGGTGAAGAGTGGAAAGGGATGGCTGTAA 1680 0.3958 MLLNIPVASLQEKFQGKIMEFKDKRMKATSEILNSIRILKLQAWEMKFLSKIIQLRKTEETWLKKFLVGTAIVRFLFYNAPTFIAVDTFGACALIGIPLESGKVLSALATFRILQMPIYSFPDTISMIAQTKVSLERIASFLRLDEWKTDVVEKLPQGSSDKAIELVDGNFSWDLSSPYPTLKNVNLTVFHGMRVAVCGNVGSGKSSLLSCIIGEVPKISGTLKICGTKAYVSESPWIQSGKIEDNILFGKEMDREKYDEVLEACSLTKDLEVLPFGDQTTIEEKGINLSGGQKQRVQIARALYQDSDIYLYDDPFSALDAHTGSHLFKCLLGLLKSKTVIYITHQVEFLSDADLIVVMREGRITQSGKYNDILRSGTDFMELVDDIVKPKGQLVQEEEREKGRVGFNVYWKYITTAYGGALVPIILLSTILTVAFQIASNYWMILATPISATAEPDIGSFKPMVVYVALSIGSSIFTFAKAFLAVIAGYKTTTVIFNKMHLCIFRAPISYFDATPSGRILNRGLVMMGHKLLFQRLVKTRDAGKDQRGRWVKSGKGWL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00814 559 Gene3D ABC transporter type 1, transmembrane domain 1 148 IPR036640 GO:0005524|GO:0016021
Gma18g00814 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 385 IPR027417 -
Gma18g00814 559 Pfam ABC transporter transmembrane region 425 523 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g00814 559 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1 384 - -
Gma18g00814 559 Pfam ABC transporter 182 316 IPR003439 GO:0005524
Gma18g00814 559 SUPERFAMILY ABC transporter transmembrane region 8 143 IPR036640 GO:0005524|GO:0016021
Gma18g00814 559 Gene3D ABC transporter type 1, transmembrane domain 389 526 IPR036640 GO:0005524|GO:0016021
Gma18g00814 559 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 130 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g00814 559 Gene3D - 158 388 IPR027417 -
Gma18g00814 559 SMART AAA_5 191 365 IPR003593 -
Gma18g00814 559 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 425 523 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g00814 559 CDD ABCC_MRP_domain1 164 363 - -
Gma18g00814 559 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 387 524 - -
Gma18g00814 559 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 384 - -
Gma18g00814 559 ProSitePatterns ABC transporters family signature. 289 303 IPR017871 GO:0005524
Gma18g00814 559 SUPERFAMILY ABC transporter transmembrane region 422 523 IPR036640 GO:0005524|GO:0016021
Gma18g00814 559 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 164 386 IPR003439 GO:0005524
Gma18g00814 559 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 387 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00814 Gma-Chr18 9246980 9250832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00814 164 379 Calmodulin-binding Proteins AT2G36910 29.130 6.36e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00814 - K05666 gmx:106794105 885.174