Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00801 ATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCGGCCTTCGGCGGCGGTGGCGCTCCAACGCCGTCTTCCAGTGGCGGCGCCGGAGCACAGGGCTCCGGCGCTGGCAAGGATCGGAAGATGGCGTCCGCGGAGCAGCTCGTGCTCGAACTCAGCAACCCTGAACTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCGTTGCTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCGAACCGAGTATGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGCCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTATGCTTGCGAACCATGGAAATGGGCAGTGAGCTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGACGATGTGGGCTTGGACTACATTTGTACTACAGCGGAGCGCTTTTTTGCGGTAGGTCGAGTTCTGGGGAACATGGTGGCAGCTCTAGCTGAGCAACCCTCATCTCGTCTATTGAAGCATATCATTCGATGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTGCCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCACATGATTGTGACCTGA 978 0.4806 MSNLPQSLSMGAAFGGGGAPTPSSSGGAGAQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00801 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
Gma18g00801 325 MobiDBLite consensus disorder prediction 1 38 - -
Gma18g00801 325 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Gma18g00801 325 SUPERFAMILY ARM repeat 49 280 IPR016024 -
Gma18g00801 325 PANTHER UNCHARACTERIZED 1 323 - -
Gma18g00801 325 Gene3D - 36 306 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00801 Gma-Chr18 9003526 9011703 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gma18g00801 Rcd1 5.7e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00801 K12606 - gmx:100784529 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00801 18 9003526 9011703 Gma08g02989 08 46459695 46468441 GST
Gma18g00801 18 9003526 9011703 Gma14g00185 14 1562722 1567152 PCT
Gma18g00801 18 9003526 9011703 Gma02g02752 02 53164568 53168661 PCT
Gma14g00185 14 1562722 1567152 Gma18g00801 18 9003526 9011703 PCT
Gma02g02752 02 53164568 53168661 Gma18g00801 18 9003526 9011703 PCT