Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00796 ATGTATAAAAAATTAACTAACAACATTGAAGATACCTGCAACAATGATCTCTCTAATGCTGCAGTTACACAGTCTTCTCCAATGATGTCGTTCAATGGGAAACGACTTGTCGTGGATGAGATAGATTTCTTCACAGAGAAGAAGAAGAAAAGTGAAGACGTTGATAATCAATTGGTGCACCACCAAATGGAGCTTCCTATTAATACCAATTTAGATCTCCTTATTACGAAGAGTTCAACCAGCAATAGATCAAATATGGAAGAAGGACCGTCCGAGTCAAGGGATAATACGAGAAATAAGTTTGCAGCTATGTTAGCTGAGTTGCACATCATAAATGCTGAAAATCAACACTTGAGAGAGCTGGTTGACCAGGTGAACAATAAGTACAATGACCTGCACAAGGATCTTACGAAACTTATGCAAAAACAACATAAAAATGAGATTAATGGAGCCATAGAGGAGAAGGATAAGAGAGATGATATGATTATTTCAAGGTCTTTCTTGGATATTGGAATTGCTACGAAGGAAGATCCTTCTCAACAACATTCAGAAGCAAAACTGCAAGAAAGCAAAAACATTACTGAGTTGATGGAGTGCAAGAATAGAGATGTTGTTGAGTTGGATTCTGGCAAGGATAGTGCAAAATCTAGGAGAGATAAGCATGAGAGTTCAGAAACCATGTCAATGATCAAGAAAGCTCGCGTATCAGTTCGAACAAAAACAGATTCATCTATGATTTCAGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCGCGATCTTATTATCGTTGCTCAATGGGAACTGCTTGTCCAGTTCGGAAGCAAGTACAAAGGAATGCTGAGGATCTAAGTGTGTTGATCACAACATATGAAGGGCAACACAATCATGTACTCCCTCCCACTGCAAAGGCCATTGCATCCACCACATCAGCAGCTGCATCAATGCTACTTTCAGGATCAATGCTAAGCTCAGATGGCCTTATATACCCAAACATATTAGAAAGTGCATCACTTCCGTTTTCTCAGAACTTAGCAACCCTCTCAACTTCAGCTCCATTTCCCACTATAACTTTGGATCTCACTCAAAGTACTACCAATAATTCCTCACAGCTACTACAAGGGGCACCACAGGATAACCAACATATATATAGCCTCCTTTCCCCACTTTTGGCTCAGAAGTTTATGTCATCAGCTACCAACATTTTTTATCAGAATCACCAGACTAAGGTTTCTAGCTTGCATGGGTCTCAGGGAACAGAAACTGCTTCATTTGTGGACACGGTAAATGCAGCTACAGCTGCTATCACTGGAGACCCGAAATTCAGTGCAGCTGTTATGGCTGCCATAACATCTATAATTGGAAGTTCACATCCAAACATTAATGTTAATCATTTTCCTATTGTTCCAGTTTACATGATTGCTTGGTGCTTCTGCTCAAAAAAAGAAGTTGTAGCTGCAGGCTCATTATGCTTTCTTTTTAGCTTAGTCAAGAGTACTTTTTGCTTTTCCCAATAA 1539 0.397 MYKKLTNNIEDTCNNDLSNAAVTQSSPMMSFNGKRLVVDEIDFFTEKKKKSEDVDNQLVHHQMELPINTNLDLLITKSSTSNRSNMEEGPSESRDNTRNKFAAMLAELHIINAENQHLRELVDQVNNKYNDLHKDLTKLMQKQHKNEINGAIEEKDKRDDMIISRSFLDIGIATKEDPSQQHSEAKLQESKNITELMECKNRDVVELDSGKDSAKSRRDKHESSETMSMIKKARVSVRTKTDSSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGTACPVRKQVQRNAEDLSVLITTYEGQHNHVLPPTAKAIASTTSAAASMLLSGSMLSSDGLIYPNILESASLPFSQNLATLSTSAPFPTITLDLTQSTTNNSSQLLQGAPQDNQHIYSLLSPLLAQKFMSSATNIFYQNHQTKVSSLHGSQGTETASFVDTVNAATAAITGDPKFSAAVMAAITSIIGSSHPNINVNHFPIVPVYMIAWCFCSKKEVVAAGSLCFLFSLVKSTFCFSQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00796 512 Coils Coil 108 142 - -
Gma18g00796 512 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00796 512 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00796 512 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 22 468 - -
Gma18g00796 512 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00796 512 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00796 512 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00796 512 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 468 IPR044810 GO:0003700
Gma18g00796 512 MobiDBLite consensus disorder prediction 206 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00796 Gma-Chr18 8940205 8943947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00796 35 465 WRKY Transcription Factor Family AT1G62300 41.478 1.30e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma18g00796 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00796 - - gmx:100779533 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00796 18 8940205 8943947 Gma08g02993 08 46489460 46494522 GST
Gma18g00796 18 8940205 8943947 Gma02g02755 02 53185354 53187654 PCT
Gma02g02755 02 53185354 53187654 Gma18g00796 18 8940205 8943947 PCT