Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00794 ATGTATTTCCCACCATACCGTCGATCCCAATTGCGTAGCAACACTTACCGTGCCCTCGTTCACCTCCTCTCTCACCTTTCTGCCTACAACGCTTCAATTCAAGCCTCAACTCAACCCCTCATCACTCCCGATAATGGCAGTGGTAGAATGGATCAAGAAAACCCGGAAAAGGAGCCTAAGTGCTATGAAGTTGTTCATTCTGATTGTTTGGATCCCAAGGATCCTATATGCCTGAAGGATATACAGGAGGTCCAGGAAATCATTGAAGGGGTTGGAGACAAGGATGTGGATTTCACTATCAACAAGATGGTCCTAGATGATATAGAACATATGATGGGAATGGAGGACATGTCTACCCAAGCAAATGGTTTTGATAAGGAGCAGGAGCTAATGAATGAGTTTGAGCAGATTATGAAAGGAACTGAGGATCTTATTTGTGATAGTGAATTCATCCCCTTGAACTTGGGATTAGATAACACACAGTGTGATGGTGGTGAAGTTGGGTTGATGGATTACCAAGCAGAAATGGAAGAAGGAGAACTCTCTGGAGACTTGGGAATAGATGGCAATTCATTTGATGTGGCTTCTGCAGATGCTTTAATATTACAACAGATGGAGGTAGATGAGGTTCAGGAGCCCGAAAATGTAACTGGAAACATGATATATCCTTCTAAGATTGAGATTCAAGAAAAGGAAAAAGGCTGTGACTCTAAATACTCTATGGTAAATGCACTTCAAGATGCCAATAATAGTGAACAAATGGAGCCTAGAACTAGTGGCAAGAAAGGGATTGTATGCGGAGTTGAAGTAGCAATTTCTGAAGAAACTATTGAATGTCAGAAGGAAGATAAAACAAAGTTGGATAATGCCAGTAAAAAGAATAAGTGTGGTGGGAACAAAGGAAAAAAGAAGAAAGCAAATAGAAAGAAGAGAGCAGAAAAGAACAAACAACTCGGTGTCAAGAGATTGCAGTTAAAGCATGTACAGAGACCAAAAGTTGTCTCACATTGTCGCCATTATCTCAACGGAAGGTGCCATGAGGGTGACAAGTGTCAGTTTTCTCATGATCCATGTACTCACTTTGCTCGTCAGTCTTGCATGAAAGGGGATGATTGCCCATTTGATCACCAGCTTTCAAAATATCCTTGTACCAATTTTGTGTCCAAAGGCTCTTGTTATAGAGGTGATGCTTGCTTGTTTTCTCACCAGGTATCAACCAAAGAAGATATCCCTACACCTTCAAATATGTGCAGACCAGAGTTGTCTCCACTTCTGTCTGGAAATGCAAATTCCAGCGCACCACTTAACAACAATCATGGCTCTAGTTCTGTCAAGCAGAACCACTTAACTAATTCTGCAGGAATTCATTCTTGCACCAGTGTTGAACATAAGGTGACAAACACTGTACTTAAACAGCCTACACCACCTAAAGGAATTAGTTTCATCAATCTTGCAAAATTATCACCCAGCCTTAGTTCACTGAAACAAGGCACAGTAACAACCAAGGAAAGTCCTGTACAAATTGGGACCCGTGAAGATCAAAGTGTGTTTCACAAAACTCAAAACAAGGTGGATATTCCTAAGAAATTGCCAACTGTGACACCTAAGGGAATAAACTTTCTTTCTTTTGGCAAAGGCTCTGTCTGCAGTTTTAAAAGTGTGAATAGGGACAATGGTATCAAATTGCCTCAGTTATTCAATTTTGGTCTGCCCGAGCAGGCAAAATCCTCTCTAAATAAAGATGATTACAACAAAGCTAGTGACAAAACAAAACAAAATGCACCGCAGACTGATATATTCTTAACTGAGATTTTAGGAAAAAATCAATCTGTTGCAGAAGAAATGAAATCAAAGCTTCCAGAGAAAACCTCCGTAGATGTTTTTATGAGGGATCACAGCCATAGTAAATCAGTTCAAGAGGGGATAAAGTCATCTGATAATTCTCAAAGTTCAAAGGGACAAAAGGCATTCTTATCAACTCTAGCATTTGCAGCTGAACATGAATCTGACATTAAGATGAAATACCCTATTGGTGGTTTGCCGATATGA 2049 0.4017 MYFPPYRRSQLRSNTYRALVHLLSHLSAYNASIQASTQPLITPDNGSGRMDQENPEKEPKCYEVVHSDCLDPKDPICLKDIQEVQEIIEGVGDKDVDFTINKMVLDDIEHMMGMEDMSTQANGFDKEQELMNEFEQIMKGTEDLICDSEFIPLNLGLDNTQCDGGEVGLMDYQAEMEEGELSGDLGIDGNSFDVASADALILQQMEVDEVQEPENVTGNMIYPSKIEIQEKEKGCDSKYSMVNALQDANNSEQMEPRTSGKKGIVCGVEVAISEETIECQKEDKTKLDNASKKNKCGGNKGKKKKANRKKRAEKNKQLGVKRLQLKHVQRPKVVSHCRHYLNGRCHEGDKCQFSHDPCTHFARQSCMKGDDCPFDHQLSKYPCTNFVSKGSCYRGDACLFSHQVSTKEDIPTPSNMCRPELSPLLSGNANSSAPLNNNHGSSSVKQNHLTNSAGIHSCTSVEHKVTNTVLKQPTPPKGISFINLAKLSPSLSSLKQGTVTTKESPVQIGTREDQSVFHKTQNKVDIPKKLPTVTPKGINFLSFGKGSVCSFKSVNRDNGIKLPQLFNFGLPEQAKSSLNKDDYNKASDKTKQNAPQTDIFLTEILGKNQSVAEEMKSKLPEKTSVDVFMRDHSHSKSVQEGIKSSDNSQSSKGQKAFLSTLAFAAEHESDIKMKYPIGGLPI 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00794 682 SUPERFAMILY CCCH zinc finger 332 356 IPR036855 GO:0046872
Gma18g00794 682 ProSiteProfiles Zinc finger C3H1-type profile. 331 358 IPR000571 GO:0046872
Gma18g00794 682 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 170 660 IPR045124 GO:0003723|GO:0045892
Gma18g00794 682 MobiDBLite consensus disorder prediction 289 317 - -
Gma18g00794 682 Pfam CCCH-type zinc finger 336 356 IPR041367 -
Gma18g00794 682 SMART c3hfinal6 358 378 IPR000571 GO:0046872
Gma18g00794 682 SMART c3hfinal6 380 404 IPR000571 GO:0046872
Gma18g00794 682 SMART c3hfinal6 330 357 IPR000571 GO:0046872
Gma18g00794 682 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
Gma18g00794 682 Gene3D - 356 416 - -
Gma18g00794 682 MobiDBLite consensus disorder prediction 296 317 - -
Gma18g00794 682 PANTHER PROTEIN SUPPRESSOR OF SABLE 170 660 - -
Gma18g00794 682 SUPERFAMILY CCCH zinc finger 381 407 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00794 Gma-Chr18 8922626 8927252 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma18g00794 zf-CCCH_4 3.1e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00794 - - gmx:100816509 1184.09