Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00785 ATGGGTAGCGAAGAAGAGAGGGTTCTTGAGAATCAACTGGAACTTCAATTGCAAGAGCAAAGGGATTCTCTCTCTGCTATCGGTCAAGCTCTTCTCTCTGATCCAACTAACCCTGAACTtctggcgGTTCATGAGGAGCTTGTTCAGGCAATTAAGGATGCAGAAGAAGGACTTCTTCACCTAAAACGTGCACGATTGTTACAGGAAGCAGATTCAGTGCTGCATAACACTAATATTTTTACTGAAGAAGAGAAAGTGGAGCCCCTTGATTCCACAGATGTTGAACCAGAGCCATTAGAGGACAAGTGTTATTCTGTTGGATCTAAATGTAGATTCCGTCACAAAGATGGACGTTGGTACAATGGTCAAGTGGTGCAGTTGGATAATGCAGTGGCAAAAGTTTCATTTCTTACTCCTACTTCTGAGAATATGTTGATGTGCAAGTTCTTTTTACAACAACGATGTCGATTTGGTAGTAACTGTCGCCTATCACATGGACTTGATGTTCAATTGTCTGCTCTTAAGAAATATGTGCCTACAATCTGGAAGCAGTCTCTTGTGGGGTCAAGTATATGGGCAGTCTCAACTGCAAATGCAGGCACTTGGAGAGAAGCCGAGCTCGAGTCCTTGGACGAAAAAGCTGGAGTTGGACAAGTTGTTTTCCGAGACAACGGAAGTTCTGTGAAAGTTGGTGCTGAAGAAATGGCGCTGTCTGAGCATGCAGAAATGAGTGACTTGGAGAGCGATTCCAGCTTAGTACAATCTGATTCCAGTGACTACGAGGAAGAGGAACCACAAGGTTTAGGATTTCTGGAGAGTACCAACCTACGGAGAGGTATTCAGACCGAAACTGCAACATTTGCCACGTGGGAGAACCACACTAGAGGCATAGCTTCCAAGATGATGGCTAATATGGGGTACAGAGAAGGAATGGGTTTAGGTGTAACCGGTCAGGGAATGCTGGACCCTATACCAGTGAAGGTGCTACCACCAAAGCAGTCCTTAGATCACGCACTGGAGTCTCATAAAAGGGAAGGGAAGGAAGGCAAGAAGAAAAGGAGCCGAGGTGGCAAAAGAAAACGTGAGAAGAAATTTGCAGAAGTGAATCGTGCAGCAAAAGAGGAAGAAGAATCGGCATCAGATGTCTTTGCATTAATAAACAATCACCTGGCAATGCACAGTGAGGCTTTTGGCAGTGGATCAATGAAGAAGCAGCAAAGTAAAGGTTCTGAGGAAGGTAAAAAGGTGGATAGACGGGCATTGGTTGCTTATGAGGAAGAGGTGAAGGATTTGAAGATGAGGGTTGAAAAGCTTGAGCACATTGTGAATGCCAATAGAAAAGAGAAGGCTGTGTATGAGGGTGCTATGAGAAAATTAAATGAAACCCGCAAGGCTTTGGCAGATGCTGAAGCAGTTCATGCCTCTGCCTCAAATTCAGTAACAAGCAAAGAAAAAGAGAAGAGATGGCTCAAGTTTTAG 1479 0.4408 MGSEEERVLENQLELQLQEQRDSLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNTNIFTEEEKVEPLDSTDVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNAVAKVSFLTPTSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEMSDLESDSSLVQSDSSDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALESHKREGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEESASDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRVEKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00785 492 Gene3D - 119 178 - -
Gma18g00785 492 Coils Coil 44 64 - -
Gma18g00785 492 MobiDBLite consensus disorder prediction 241 266 - -
Gma18g00785 492 Pfam G-patch domain 294 336 IPR000467 GO:0003676
Gma18g00785 492 Coils Coil 421 448 - -
Gma18g00785 492 MobiDBLite consensus disorder prediction 396 416 - -
Gma18g00785 492 SUPERFAMILY CCCH zinc finger 142 166 IPR036855 GO:0046872
Gma18g00785 492 SMART c3hfinal6 141 167 IPR000571 GO:0046872
Gma18g00785 492 MobiDBLite consensus disorder prediction 339 373 - -
Gma18g00785 492 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 492 - -
Gma18g00785 492 Pfam CCCH-type zinc finger 146 166 IPR041367 -
Gma18g00785 492 Coils Coil 452 472 - -
Gma18g00785 492 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Gma18g00785 492 SMART G-patch_5 292 338 IPR000467 GO:0003676
Gma18g00785 492 ProSiteProfiles G-patch domain profile. 294 340 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00785 Gma-Chr18 8768030 8773678 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma18g00785 G-patch 1.1e-11 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00785 - - gmx:100794921 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00785 18 8768030 8773678 Gma08g03002 08 46551394 46557703 GST