Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00773 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTGAAACTTGCTGATGATATCACTGGCATGATTTCTGAACGTAGTTCATTCCCTGCATCTGGACCAGAAACCCAGCGACATGCATCTGCTATAAGAAGGAAGATCACGATATTGGGGACCAGACTTGATAGCTTGCAATCTCTTTTGTCAAAGGTCCCTGCAAAAACTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTTTGAATTTGAGGACAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGTTTGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACATATTGCGTTGGCTGTGAATGAAGAGCTGAATCTACATACCAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCAGTGTTAAACAAACGCACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTCATTGGTATAGTGGGTTTGGTTGTTGTCATATGGCTGCTGGTCAAATATTTGTAA 690 0.4217 MASSSDSWMKEYNEAVKLADDITGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLLNLRTKVNQMASTLNMSNFANRDSLFGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVGLVVVIWLLVKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00773 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 224 - -
Gma18g00773 229 CDD SNARE_Qc 136 193 - -
Gma18g00773 229 SMART tSNARE_6 128 195 IPR000727 -
Gma18g00773 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Gma18g00773 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Gma18g00773 229 Pfam SNARE domain 170 221 IPR000727 -
Gma18g00773 229 PANTHER SYNTAXIN 1 224 IPR045242 -
Gma18g00773 229 Gene3D - 135 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00773 Gma-Chr18 8586679 8591412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00773 1 229 SNARE and Associated Proteins AT1G16240 72.414 1.24e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00773 K08503 - gmx:100794038 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00773 18 8586679 8591412 Gma18g00773 18 8586679 8591412 ECH
Gma18g00773 18 8586679 8591412 Gma08g03012 08 46695856 46700504 GST
Gma18g00773 18 8586679 8591412 Gma14g00162 14 1299722 1302149 PCT
Gma14g00162 14 1299722 1302149 Gma18g00773 18 8586679 8591412 PCT