Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00764 ATGTATCTGTTTAAAGAAGGTTCATATCTGGGATTTACAGGTTCGATATGCTCCTCACTTTTCTCTTGTTTTACGAGGTCTTACTTGCATGTTTCCTGCTGTGCTGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACCCCAGCGCAAACACTTTCCCGACTCATTGAACCTGTTGCTGGACAAATATTGATAGATAGTGTTAACATTTCTTTGATGGGAATTCATGATTTGTGGTCCAGACTAAACATTATTCCTCAAGATCCAACAATGTTTGAAGGGACTGTAAGAACCAACCTGGACCCACTGGAAGAGTACACAGATGAACAGATTTGTGAGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAGTTGGTCTGCCTCTGCCGTGTTCTACTTAAGAAAAGAAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAGGTTGATTAA 507 0.4043 MYLFKEGSYLGFTGSICSSLFSCFTRSYLHVSCCAGAKTGIVGRTGSGKSTPAQTLSRLIEPVAGQILIDSVNISLMGIHDLWSRLNIIPQDPTMFEGTVRTNLDPLEEYTDEQICELLRMEKIGVWVKGSWSASAVFYLRKERSWCLMKLLHQLIQPQIILFSKQVD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00764 168 Pfam ABC transporter 30 119 IPR003439 GO:0005524
Gma18g00764 168 Gene3D - 11 155 IPR027417 -
Gma18g00764 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 123 IPR027417 -
Gma18g00764 168 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 31 125 - -
Gma18g00764 168 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gma18g00764 168 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 31 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00764 Gma-Chr18 8223514 8225098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00764 31 104 Calmodulin-binding Proteins AT2G36910 29.730 6.63e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00764 - K05666 gmx:106794105 148.288