Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00742 ATGGACGCCGGCGAAGCCCTCTCTGACGATCCGAATCGGCCCAATTCCGCCGCCGACGCAGCTCCGGCCACCGCCGGAGCAAGGTACAAGCTCATGTCACCGGCCAAGCTCCCGATCTCGCGCTCGCCGTGCGTCACGATTCCGCCGGGGCTCAGTCCGACGTCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGATCCCTTTCTTTGCTTCATCAAACAGCACATGGTTCCGTGACTTCTGCTGCATCTTCTACATTTCCTGTAACCACTGTATGCTTCAATACCAATACTGTTGATGACAGAAAACCTAGCTTCTTTGAGTTTAAACCACACAATAGATCAAATATGGTTCCCGCAGACTTTGACAACCATGCAAGTGAAAAATCTACTCAAATAGATGGTCAAGGAAAAGCTCAAGCTTTTGATTCATCACCATTAGTAAAAAATGAGTCAGCATCCCCTTCAAATGAATTAAGTCTATCATCACCTGTTCAAATGGATTGCTCAGGAGGTAGTGCCCGTGTTGAAGGTGATTTGGATGAATTGAACCCTAGAAGCAACATAACAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTTCCGTTGCAGCTGATAGAGTATCTGATGATGGATACAACTGGAGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAATTGTGAAGTCAAGAAACTATTTGAACGCTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAACCGCCGTTACTCTGCTGGAACTATTATGTCTGTGCAAGAAGAGAGATCTGATAAAGTTTCTTTGACCAGCCGAGATGACAATGGATCCTATATGTGTGGCCAGGGGTCTCACCTGGCTGAGCCTGACAGTCAACCAGAGCTATCGCCTGTAGCAACAAATGATGGTGATCTAGATGGTTTGGGGGTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGCAGAAAAATGGACCTTGGAATTGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATCTTGGATGATGGCTACCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAACACTGGTTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCTGTGATTACCACATATGAGGGGAAGCACAATCATGATGTTCCAACTGCAAGGAATAGTTGCCATGACATGGCAGGACCAGCAAGTGCAAGTGGACAGACAAGAATTAGGCCCGAAGAAAGTGATACCATCAGCCTTGACCTTGGGATGGGAATTAGCCCAGCTGCTGAAAACACACCAAACAGTCAAGGGAGAATGATGCTTTCTGAATTTGGGGATAGTCAAACTCACACCAGCAATTCCAATTTCAATTTTGTTCATACTACGACAGTGCCGGGGTACTTTGGTGTGCTAAATAACAACTCTAACCCATATGGTTCTAGAGAAAATCCAAGTGATGGTCCATCTTTAAACCATTCTGCTTATCCTTGCCCTCAGAACATAGGGAGAATACTAATGGGTCCTTAA 1737 0.4583 MDAGEALSDDPNRPNSAADAAPATAGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLSLLHQTAHGSVTSAASSTFPVTTVCFNTNTVDDRKPSFFEFKPHNRSNMVPADFDNHASEKSTQIDGQGKAQAFDSSPLVKNESASPSNELSLSSPVQMDCSGGSARVEGDLDELNPRSNITTGLQASQVDNRGSGLSVAADRVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGTIMSVQEERSDKVSLTSRDDNGSYMCGQGSHLAEPDSQPELSPVATNDGDLDGLGVLSNRNNDEVDDDDPFSKRSRKMDLGIADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSCHDMAGPASASGQTRIRPEESDTISLDLGMGISPAAENTPNSQGRMMLSEFGDSQTHTSNSNFNFVHTTTVPGYFGVLNNNSNPYGSRENPSDGPSLNHSAYPCPQNIGRILMGP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00742 578 ProSiteProfiles WRKY domain profile. 393 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 MobiDBLite consensus disorder prediction 134 178 - -
Gma18g00742 578 Pfam WRKY DNA -binding domain 399 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 MobiDBLite consensus disorder prediction 462 481 - -
Gma18g00742 578 Gene3D WRKY domain 214 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 Gene3D WRKY domain 383 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 MobiDBLite consensus disorder prediction 296 338 - -
Gma18g00742 578 MobiDBLite consensus disorder prediction 545 566 - -
Gma18g00742 578 MobiDBLite consensus disorder prediction 1 23 - -
Gma18g00742 578 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 558 IPR044810 GO:0003700
Gma18g00742 578 SMART WRKY_cls 398 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 MobiDBLite consensus disorder prediction 129 181 - -
Gma18g00742 578 MobiDBLite consensus disorder prediction 344 363 - -
Gma18g00742 578 SUPERFAMILY WRKY DNA-binding domain 390 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 SUPERFAMILY WRKY DNA-binding domain 220 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g00742 578 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00742 Gma-Chr18 7883446 7888755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00742 32 578 WRKY Transcription Factor Family AT4G26640 56.708 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma18g00742 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00742 - - gmx:100781491 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00742 18 7883446 7888755 Gma18g00742 18 7883446 7888755 ECH
Gma18g00742 18 7883446 7888755 Gma08g03037 08 46958315 46964293 GST
Gma18g00742 18 7883446 7888755 Gma14g00148 14 1188585 1194130 PCT
Gma18g00742 18 7883446 7888755 Gma02g02789 02 53493181 53498538 PCT
Gma14g00148 14 1188585 1194130 Gma18g00742 18 7883446 7888755 PCT
Gma02g02789 02 53493181 53498538 Gma18g00742 18 7883446 7888755 PCT