Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00725 ATGAACGATGTAGTGATGACAATTGACGAGTCGATTATGCTCTGCAACTCTCTTTCTCTCTCTTTCCATTTCCATGTTCATGGCAATTTCAAGATGGCTGTGAACAATCGCTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCTCAGGAGCGCGGTAATCGCGTGGTTCACTATTACCTGAAGGATTCTGCAGGGGAACCCGTCCTTGCAGTTGTGGGCACTGAGAGGAGTGTTAGGCACATGTGCTATGTTGTTGCTGAGGAGTTCCTTGAAATTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGGGAGGTGGTAGATTGGCTGACATCAACACTATCGAAGCAAAATCTGCAGGGAGATAGAAGTGTATCATCTGGTCATAACTTGGTACCAGCTCATGAGACCACAAATGACACTGTCAACGAAATTACTGGTCTGTCTGTTCAAATAACAGATGACAAGGACTTTCCTATGAGTAACTCCAAACTATCCAATTCAGACATTGTTTGGTCAGGAGTTGCATGGAGATGTGGCAAACAACTTAAGCATTATCCAGCTTTTTTCAGGAATGGCATCAAAATAGCGATTCAATCCTTTGTTTTTGTTATGGGCAAGGGAGAGAACCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGACAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAGTTCCTGTAAGAAATCTTCACCCTCGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGCGTAGATGGTTCTGCCACAGTCTTAACTCGTGAACACTATGAAAAATGCATGCCTTTTTTTTCCCCCACTTCAAGGGACAGAATACATTTGTGCTTTAGGCAGTTTAGAAGCAACAAAGTCAAGCCCTTTGACTTCAGTAAACTGCGTGGTTACTATACTCAACCAATTCTTTCTTGCTTGCACCATGATTCAATCCAGAACCCTGAGAGCCTTGTGGGAGAAGATGAAGAGTTGAGTGCAGGTGAGGATGTGAAGGTAGGAGCCAAGAGGAGGAGAGGTGATAAGGGGTCTCCTCAGTCTTGGATAAGTCGCCAGGGAGTTAGGAAGTTAATTAAGAGTAAGCAAATGATGGTATACAAAACCTTCCAGGTTGCAAATTATGCAAGATCAGAAAGGAGATTGCTTTCTCGGAAGCAGGTTGAGTGTCAACCTTGGTCTAACCACACATACAAGGTTGATGACAAGATAGAGTTACTTTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAGCAGTTGAAAGTCCAATATGATGATGTCCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGTTAGCCAGGCCTGATAAACTTGGGATGAGGCATTCTGGCCGCCCCACCATCAGGCCTGCTCCAACTTATGAGGAACAGGAACTAGCTGTTGAGGTTGGAAATGCAGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGGGTTGTAACTAGAAATGACAACTGTGGTGATGATAGTGCTCAAGTCTACTTTCCCGGTGAATGCTTGCTGATGAAAGTGTGCAAGAAGGATTTAAGAATATCTAGAGATTGGTTAGGGGACAGTTGGATTAACATTATGGCAAAACCTGAAATAACTAAAACTATTATATTCACAGCTAATAATAGTTTTAACACAGAGCTTTATGTGTCCCCATCTATCGCTAAAGATGTGGACTCTGTTGGTTTTGCTAATTCATGTCATGGTGATCCTGTTAGTAAGAAGTCAAATGAACCGGTTATCaaagaagtgaatcttgtgtcttgtgatggctctactaaagaagagaattttgtgtcttgtgatgactctGCTGAAGATAGGGACTGTGTTCAGGATAATAAACCCTCTTCAGAAAAATGTACTCAAGCtgaaaatattgattcagatgtcaattgtgatcatgaagacaattgtgttgataatgataatgataagaatagcgatgatggtggtaacaagaatgatgatgataatggaaataaagatatggaggtatttgaaacttctgTACTGGATGGAGAAACTGTAGAGCTCATGGAAGTGGCTGTATAA 2187 0.3905 MNDVVMTIDESIMLCNSLSLSFHFHVHGNFKMAVNNRCFVEWKEQFVSQERGNRVVHYYLKDSAGEPVLAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSVSSGHNLVPAHETTNDTVNEITGLSVQITDDKDFPMSNSKLSNSDIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNLHPREVFITPYSQVISAECVDGSATVLTREHYEKCMPFFSPTSRDRIHLCFRQFRSNKVKPFDFSKLRGYYTQPILSCLHHDSIQNPESLVGEDEELSAGEDVKVGAKRRRGDKGSPQSWISRQGVRKLIKSKQMMVYKTFQVANYARSERRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLARPDKLGMRHSGRPTIRPAPTYEEQELAVEVGNAVDAWWSDGWWEGVVTRNDNCGDDSAQVYFPGECLLMKVCKKDLRISRDWLGDSWINIMAKPEITKTIIFTANNSFNTELYVSPSIAKDVDSVGFANSCHGDPVSKKSNEPVIKEVNLVSCDGSTKEENFVSCDDSAEDRDCVQDNKPSSEKCTQAENIDSDVNCDHEDNCVDNDNDKNSDDGGNKNDDDNGNKDMEVFETSVLDGETVELMEVAV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00725 728 Pfam Agenet domain 425 499 IPR008395 -
Gma18g00725 728 MobiDBLite consensus disorder prediction 684 708 - -
Gma18g00725 728 Pfam BAH domain 202 307 IPR001025 GO:0003682
Gma18g00725 728 SMART BAH_4 199 318 IPR001025 GO:0003682
Gma18g00725 728 ProSiteProfiles BAH domain profile. 199 318 IPR001025 GO:0003682
Gma18g00725 728 SMART agenet_At_2 420 485 IPR014002 -
Gma18g00725 728 SMART agenet_At_2 506 564 IPR014002 -
Gma18g00725 728 Gene3D - 167 317 IPR043151 -
Gma18g00725 728 PANTHER OS07G0607300 PROTEIN 35 692 - -
Gma18g00725 728 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 35 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00725 Gma-Chr18 7670885 7681420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00725 434 562 PHD Transcription Factor Family AT5G58610 30.075 2.92e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00725 - - gsj:114395106 1403.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00725 18 7670885 7681420 Gma18g00725 18 7670885 7681420 ECH
Gma18g00725 18 7670885 7681420 Gma08g03051 08 47146303 47153584 GST