Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00690 ATGGCTTCATTTCCTTCAAATTTTGCATTGGAACATAGCATGGCTAGTGCACAAAATAGTCACTCTCCTGCTTCCTCACCTTCTTTCATGACTAGAGTGGCCATGAGAATATCTAGATCAAGATGGTTCACCTTCTTGAGAAGAGTATTCCATTACCAAAATGGACCGAGATCCGATCTCGGCTCCAACCCTTTCAATTCCAGCACTTGGATGATGCTGGAGTTGATTGCTTTGTTGGTCCAGATAACAAGCACAACATTCACTTTGGCCATTTCAAAGAGTGAGAAGCCAATTTGGCCTATGAGGGTGTGGATAGCAGGTTATGATATTGGTTGTGTCCTTAATCTTCTTCTACTTTGTGGCCGCTACCATCAACTTCATGTCACTCAAGGGAATAACGCTCTTACCCTCTCTGAATTGGAGCAGCAGAGAAACAATGAAGAATCAAGTGTGTACAGGAGCTCACATTTGATAGACAAATGCCGTAGTTCACTAGAGCTTTTCTTTGCCATATGGTTCGTGATGGGCAATGTATGGGCCTTTGACTCACGTTTTGGGTCCTTCCCACAAGCTCCAAAACTCCAAGTGCTCTGCATCATCTTGCTTTCTTGGAATGCAATATGCTACTCTTTCCCTTTCCTACTGTTTTTGCTTTTGTGTTGTTGTGTGCCACTAATGAGCACCCTCCTTGGATACAACATGAGCATGGGGTCCTCTGCTAGAGGGGCATCTGAAGATCAAATCTCACAACTCCCAAGTTGGAGATATAAAGGGGTTCACACCAACTTGGACCTTGGCAATGACTCTCAAAGCAGTGAAAGATTGATCAATGAAGATCCAGAATGCTGCATTTGCTTGGCCAAATACAAAGACAAAGAAGAAGTTAGGCAATTACCCTGTTCCCATTTGTTCCACCTAAAATGTGTGGATCAATGGTTAAGAATTATATCATGCTGCCCTCTTTGCAAACAAGGATTACAAAGGTAG 987 0.4306 MASFPSNFALEHSMASAQNSHSPASSPSFMTRVAMRISRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLVQITSTTFTLAISKSEKPIWPMRVWIAGYDIGCVLNLLLLCGRYHQLHVTQGNNALTLSELEQQRNNEESSVYRSSHLIDKCRSSLELFFAIWFVMGNVWAFDSRFGSFPQAPKLQVLCIILLSWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASEDQISQLPSWRYKGVHTNLDLGNDSQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHLKCVDQWLRIISCCPLCKQGLQR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00690 328 SMART ring_2 282 322 IPR001841 -
Gma18g00690 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 327 IPR013083 -
Gma18g00690 328 SUPERFAMILY RING/U-box 273 326 - -
Gma18g00690 328 Pfam RING-like zinc finger 281 309 IPR001841 -
Gma18g00690 328 CDD RING-H2_RNF111_like 280 323 - -
Gma18g00690 328 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 13 327 - -
Gma18g00690 328 ProSiteProfiles Zinc finger RING-type profile. 282 323 IPR001841 -
Gma18g00690 328 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 13 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00690 Gma-Chr18 7094166 7096937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00690 29 326 C3H Transcription Factor Family AT4G26580 68.121 9.64e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00690 - - gmx:100818715 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00690 18 7094166 7096937 Gma18g00690 18 7094166 7096937 ECH