Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00682 ATGCCACAAGAGAGCTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTCTCCATCAACAAGGAGCCTTCATGCACTGCTGCCACAGATGAGAGTTTCAATGATAATGAATTGGCTCAGAGGAAGGCAGAGGAAGCAGCTTCGAGAAGATACAAAGCAACTGAATGGCTACGCCAAATGGACCACTTTGCGTCTTCATCACTCTCTCCAACTCCCTCCGAAGAAGAGTTTTGCCTTTCACTCCGCAATGGCCTCATTCTATGCAATGTCCTCAACAAAGTCAACCCCGGTGCTGTCCTTAAGGTGGTGGACAATCCTGGGCTTGCTGTCCAGTCTGCAGAGGGGGCGGCCCATTCTGCAATTCAGTATTTTGAGAACATGAGGAACTTTTTGGAGGCTGTTAAGGATATGCAGCTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGATTTTATGATTGGAAGTTATCTGGTGGGGTTGGTGTGTGGAGATATGGTGGAACTGTGAGGATCACTTCCTTTCCAAAGAAGTCTCCTTCCTCCACAGTTGGCAGTGAAAGTGCTGATGAATCACTGGATGAGTCAGAATCATCACAGTATGAACAATTGCTTGAATTCCTTCAACTATCTGAAGACTTCTTGATTGAAGAAACCAGAACTGCCAATGCTCTTGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATAATGGGATTGAAGATCTGCCTCTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCATCTTTGCTTGTTTCTCAAGGCAATCAGCTTGGACTTTTCCTTAAGAAAATACTTAAAGGTGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAACCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAATTGTGGTGGAAAGCGTGATAGTATTCGACAGAATGCCAATTATTCTGAAAAATATGTTGAAGTAATCAATACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAGACAAATTCAATCAGAATGGGAAGAAGAATTGAGTAGGCTAGAGCATCATATCAAAAGCCTGGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAACCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGGCCATTCTTACCAGGACAATCAAATGGACCGTCAACGGTAGACTACATTGGAGAAAATGGAGATATGATGATAGTAAATCCCCTTAAACATGGAAAAGATGCTAGAAGGGTTTTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAATCGTTGATTAGATCTGTTTTAGATGGTTACAATGTATGCATCTTTGCATACGGACAAACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCTGGTTCCATAAAATATGAAGTTTTTGTTCAGATGATTGAAATCTACAATGAACAAGTGAGAGATTTACTAGTCAACATACGAAACACTTCTCAATTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAACCGTGCTGTAGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGTTGTCTTCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGAAAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATAAACAGATCACTTTCTGCACTTGGGGATGTTATCTCAGCCTTGGCACAGAAGAGTCCACATATCCCTTATAGGAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTGAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTTCGTCCATTGAACTTGGAGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCGAGATCTAAAGGAAGAGATATCAAGTCTCAGATTAGCATTGGAGAAGAAGGAAGCTGAATTGGAGCAATGTAAGGCTGGGAATGCTCGAAACACCATTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGTACCAGTGGCAACATGAAGCATGAAAGTGGTCAAAGACTCATGGATGATAGAAACTTTGAGTCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTTATAGACAAGGACTCCATGCCAAAAATGTCTCTACTAACGGAAGAAAAGTTAGTGAGCTCAGGGAAAGGAAGATCACAATCCCCTCCAGTAAGAAGATCACTATCCAATGATAGAGGGACAACCATTAAAAGCAAGGTCAAAACTGAAACAGTAGACAACCAACCAATATTAAAGCATCCATTTCCAGCTAGAGTACCAGCTAACAAATCCCTTGCCACAATGCCAGTGGCTGCATCCACTGACAATAACACAAGAATGTATGTGAATTCACAAGAGCCAGTAAAGCAGGAAAACATTTCTGAAACACTCTTCAACCTCCAGAAGGTCAACTATAAGAAAGTAAATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTCAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGCAAGGTTGAGAGTATGGCTAAAGCCAAGCATCCTCAACTATCACCCTTTAAGATTCAAAAGCCTGATCTGATCCCAACATTTATTCCTGACATGGATTTTGCTGGTGAAATCAATTTAGAGCAACCTCCAAAGAATGATTACTCTGAGGCTGAAAATGATCTTAGATTTATGGAGACTGCTGTCCATGGTGCTTTAAGTCTCAAAAAAATACGTCAGAACTTTGCTAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAAAACAAAGTTGTGAATGGTTCGGGTAGCAATATTAAAGAAGGAAGCAATGCATCCACGCCTGAATTTAGAAGGAGCCGATCTACCCCTCGTGGAAAGTTTTTTGGTTTATCATGA 3396 0.4078 MPQESSQNSFFTSPSKRGLKGLVSINKEPSCTAATDESFNDNELAQRKAEEAASRRYKATEWLRQMDHFASSSLSPTPSEEEFCLSLRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYDWKLSGGVGVWRYGGTVRITSFPKKSPSSTVGSESADESLDESESSQYEQLLEFLQLSEDFLIEETRTANALAFLYDHFGLRLLQAYLREANNGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSEKYVEVINTQQKQLEGMKYFFEETKLEVRQIQSEWEEELSRLEHHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGPSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQSLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERAGSIKYEVFVQMIEIYNEQVRDLLVNIRNTSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVEKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVSSIELGAAQSNKETGEIRDLKEEISSLRLALEKKEAELEQCKAGNARNTIDSQKPRAVSPFQLPKYGTSGNMKHESGQRLMDDRNFESRSCSSGKQRRSRFPSAFIDKDSMPKMSLLTEEKLVSSGKGRSQSPPVRRSLSNDRGTTIKSKVKTETVDNQPILKHPFPARVPANKSLATMPVAASTDNNTRMYVNSQEPVKQENISETLFNLQKVNYKKVNQEHEEEQFKQALSAVRQGGIRKSKVESMAKAKHPQLSPFKIQKPDLIPTFIPDMDFAGEINLEQPPKNDYSEAENDLRFMETAVHGALSLKKIRQNFARNFQNLESRGIVQTGEPLLVSKVENKVVNGSGSNIKEGSNASTPEFRRSRSTPRGKFFGLS 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00682 1131 Coils Coil 391 411 - -
Gma18g00682 1131 SMART ch_5 55 172 IPR001715 GO:0005515
Gma18g00682 1131 ProSiteProfiles Calponin homology (CH) domain profile. 53 174 IPR001715 GO:0005515
Gma18g00682 1131 MobiDBLite consensus disorder prediction 1099 1118 - -
Gma18g00682 1131 Pfam Calponin homology (CH) domain 55 172 IPR001715 GO:0005515
Gma18g00682 1131 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 1126 - -
Gma18g00682 1131 MobiDBLite consensus disorder prediction 837 859 - -
Gma18g00682 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 791 IPR027417 -
Gma18g00682 1131 MobiDBLite consensus disorder prediction 1099 1131 - -
Gma18g00682 1131 MobiDBLite consensus disorder prediction 872 901 - -
Gma18g00682 1131 ProSiteProfiles Kinesin motor domain profile. 435 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 PRINTS Kinesin heavy chain signature 625 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 PRINTS Kinesin heavy chain signature 705 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 PRINTS Kinesin heavy chain signature 656 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 Gene3D - 45 173 IPR036872 -
Gma18g00682 1131 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 28 1126 - -
Gma18g00682 1131 Gene3D Kinesin motor domain 378 757 IPR036961 -
Gma18g00682 1131 SUPERFAMILY Calponin-homology domain, CH-domain 47 201 IPR036872 -
Gma18g00682 1131 SMART kinesin_4 433 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 MobiDBLite consensus disorder prediction 876 901 - -
Gma18g00682 1131 Pfam Kinesin motor domain 441 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma18g00682 1131 Coils Coil 769 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00682 Gma-Chr18 6994151 7004269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00682 426 755 Calmodulin-binding Proteins AT5G65930 41.860 3.05e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00682 K10406 - gmx:100786466 2154.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00682 18 6994151 7004269 Gma18g00682 18 6994151 7004269 ECH
Gma18g00682 18 6994151 7004269 Gma08g03093 08 47617887 47627553 GST
Gma18g00682 18 6994151 7004269 Gma14g00106 14 876065 885151 PCT
Gma18g00682 18 6994151 7004269 Gma02g02833 02 53816077 53829221 PCT
Gma14g00106 14 876065 885151 Gma18g00682 18 6994151 7004269 PCT
Gma02g02833 02 53816077 53829221 Gma18g00682 18 6994151 7004269 PCT