Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g00681 | ATGGATACTAAGTCGGCTGTAGAATTAATGGAGTCTTCCGCAGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGGCTAGCATAGAACAACCAACAACCTCAGAAACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGTGCAGCATCTGGCAAGACAACAGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGCACTGAATTCTTTCTTTGATTCTTTTTACAATAACTTGACGGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGCTACGCGTTATGGACAAGTTGAAGCATGGCGAAGCTGTAGATATTCCAAAGTATGATTTTAAGAGTTACAAGAGTGATGACATGTTAAGAAGGGTGAACCCTTCAGATGTTATAATTTTAGAAGGCATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGGATTAGGCGTGACACTACTGAGAAGGGTCGGGATATTGGAGCAGTTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATTCGCACAAAGCTTGGTCAGCATGACCTGTGTAAAATATATCCTAATTTGTATGTCATTCAGTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATGCCAAGACAACAAAGCATGATTTTGTATTTTACTCTGATCGATTGATTCGATTGGTTGTGGAACATGGTTTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCTACTGGTTCTGTATACACTGGTGTTGATTTTTGTAAAAGGTTGTGTGGTGTCTCTGTTATCAGAAGtggggagagtatggagaatgctttgagagcatgctgtaaaggtatcaagattgggaaaattttaattcacagagaaggTGACAATGGTCAGCAGCTAATATATGAAAAGTTGCCAAATGATATCTCTGATAGGCATGTGTTACTGTTGGACCCTATACTTGGCACAGGGAATTCGGCTGTTCAAGCAATTTCTTTACTCATAAAAAAGGGTGTACCTGAGTCCAACATTATATTTCTTAATCTCATATCTGCACCTAAAGGTGTGCATGTGGTATGCAAAAGTTTTCCAAGAATAAAGATAGTAACATCTGAGATTGAGATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGCGAGTTTGGAGATCGGTACTTTGGAACAGATGATGATGATGAGCAAGTGGTAGTTTCTTCCCAGTAG | 1452 | 0.3719 | MDTKSAVELMESSAEVHFSGFHMDGFEQRKASIEQPTTSETDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQALNSFFDSFYNNLTEEELTRVQDYNFDHPDAFDTEQLLRVMDKLKHGEAVDIPKYDFKSYKSDDMLRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTTEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDEQVVVSSQ | 483 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g00681 | 483 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 36 | 245 | IPR027417 | - | |
Gma18g00681 | 483 | SUPERFAMILY | PRTase-like | 255 | 472 | IPR029057 | - | |
Gma18g00681 | 483 | Pfam | Phosphoribulokinase / Uridine kinase family | 49 | 240 | IPR006083 | GO:0005524|GO:0016301 | |
Gma18g00681 | 483 | Gene3D | - | 43 | 255 | IPR027417 | - | |
Gma18g00681 | 483 | PANTHER | URIDINE KINASE | 15 | 474 | - | - | |
Gma18g00681 | 483 | Pfam | Uracil phosphoribosyltransferase | 270 | 471 | - | - | |
Gma18g00681 | 483 | PANTHER | URIDINE KINASE | 15 | 474 | - | - | |
Gma18g00681 | 483 | Gene3D | - | 256 | 471 | IPR029057 | - | |
Gma18g00681 | 483 | TIGRFAM | udk: uridine kinase | 46 | 252 | IPR000764 | - | |
Gma18g00681 | 483 | PRINTS | Uridine kinase signature | 47 | 64 | - | - | |
Gma18g00681 | 483 | PRINTS | Uridine kinase signature | 128 | 143 | - | - | |
Gma18g00681 | 483 | PRINTS | Uridine kinase signature | 184 | 194 | - | - | |
Gma18g00681 | 483 | PRINTS | Uridine kinase signature | 198 | 209 | - | - | |
Gma18g00681 | 483 | PRINTS | Uridine kinase signature | 220 | 233 | - | - | |
Gma18g00681 | 483 | CDD | UMPK | 49 | 252 | IPR000764 | - | |
Gma18g00681 | 483 | CDD | PRTases_typeI | 329 | 444 | IPR000836 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g00681 | Gma-Chr18 | 6935377 | 6941589 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g00681 | 1 | 474 | PRT Gene Family | AT4G26510 | 82.353 | 0.0 | 812 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g00681 | K00876 | - | gmx:100527893 | 918.302 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g00681 | 18 | 6935377 | 6941589 | Gma08g03094 | 08 | 47642421 | 47649708 | GST | |
Gma18g00681 | 18 | 6935377 | 6941589 | Gma14g00105 | 14 | 858693 | 865796 | PCT | |
Gma18g00681 | 18 | 6935377 | 6941589 | Gma02g02834 | 02 | 53833066 | 53839913 | PCT | |
Gma14g00105 | 14 | 858693 | 865796 | Gma18g00681 | 18 | 6935377 | 6941589 | PCT | |
Gma02g02834 | 02 | 53833066 | 53839913 | Gma18g00681 | 18 | 6935377 | 6941589 | PCT |