Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00681 ATGGATACTAAGTCGGCTGTAGAATTAATGGAGTCTTCCGCAGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGGCTAGCATAGAACAACCAACAACCTCAGAAACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGTGCAGCATCTGGCAAGACAACAGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGCACTGAATTCTTTCTTTGATTCTTTTTACAATAACTTGACGGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGCTACGCGTTATGGACAAGTTGAAGCATGGCGAAGCTGTAGATATTCCAAAGTATGATTTTAAGAGTTACAAGAGTGATGACATGTTAAGAAGGGTGAACCCTTCAGATGTTATAATTTTAGAAGGCATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGGATTAGGCGTGACACTACTGAGAAGGGTCGGGATATTGGAGCAGTTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATTCGCACAAAGCTTGGTCAGCATGACCTGTGTAAAATATATCCTAATTTGTATGTCATTCAGTCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATGCCAAGACAACAAAGCATGATTTTGTATTTTACTCTGATCGATTGATTCGATTGGTTGTGGAACATGGTTTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCTACTGGTTCTGTATACACTGGTGTTGATTTTTGTAAAAGGTTGTGTGGTGTCTCTGTTATCAGAAGtggggagagtatggagaatgctttgagagcatgctgtaaaggtatcaagattgggaaaattttaattcacagagaaggTGACAATGGTCAGCAGCTAATATATGAAAAGTTGCCAAATGATATCTCTGATAGGCATGTGTTACTGTTGGACCCTATACTTGGCACAGGGAATTCGGCTGTTCAAGCAATTTCTTTACTCATAAAAAAGGGTGTACCTGAGTCCAACATTATATTTCTTAATCTCATATCTGCACCTAAAGGTGTGCATGTGGTATGCAAAAGTTTTCCAAGAATAAAGATAGTAACATCTGAGATTGAGATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGCGAGTTTGGAGATCGGTACTTTGGAACAGATGATGATGATGAGCAAGTGGTAGTTTCTTCCCAGTAG 1452 0.3719 MDTKSAVELMESSAEVHFSGFHMDGFEQRKASIEQPTTSETDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQALNSFFDSFYNNLTEEELTRVQDYNFDHPDAFDTEQLLRVMDKLKHGEAVDIPKYDFKSYKSDDMLRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTTEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDEQVVVSSQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00681 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 245 IPR027417 -
Gma18g00681 483 SUPERFAMILY PRTase-like 255 472 IPR029057 -
Gma18g00681 483 Pfam Phosphoribulokinase / Uridine kinase family 49 240 IPR006083 GO:0005524|GO:0016301
Gma18g00681 483 Gene3D - 43 255 IPR027417 -
Gma18g00681 483 PANTHER URIDINE KINASE 15 474 - -
Gma18g00681 483 Pfam Uracil phosphoribosyltransferase 270 471 - -
Gma18g00681 483 PANTHER URIDINE KINASE 15 474 - -
Gma18g00681 483 Gene3D - 256 471 IPR029057 -
Gma18g00681 483 TIGRFAM udk: uridine kinase 46 252 IPR000764 -
Gma18g00681 483 PRINTS Uridine kinase signature 47 64 - -
Gma18g00681 483 PRINTS Uridine kinase signature 128 143 - -
Gma18g00681 483 PRINTS Uridine kinase signature 184 194 - -
Gma18g00681 483 PRINTS Uridine kinase signature 198 209 - -
Gma18g00681 483 PRINTS Uridine kinase signature 220 233 - -
Gma18g00681 483 CDD UMPK 49 252 IPR000764 -
Gma18g00681 483 CDD PRTases_typeI 329 444 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00681 Gma-Chr18 6935377 6941589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00681 1 474 PRT Gene Family AT4G26510 82.353 0.0 812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00681 18 6935377 6941589 Gma08g03094 08 47642421 47649708 GST
Gma18g00681 18 6935377 6941589 Gma14g00105 14 858693 865796 PCT
Gma18g00681 18 6935377 6941589 Gma02g02834 02 53833066 53839913 PCT
Gma14g00105 14 858693 865796 Gma18g00681 18 6935377 6941589 PCT
Gma02g02834 02 53833066 53839913 Gma18g00681 18 6935377 6941589 PCT