Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00677 ATGTGCCCTGTTCCATCAAGATGGCGCGGAATCTGCCAACTTGACAATTTTATTTGCAACAGGAAATTGATAGGAGCAAGATTCTTCAGCAATGGTTATGAGTCAAAGTTTGGCAAACTTAACAAAACACTTTACACAGCACGGGACCTATTTGGCCATGGCAATGGCACTGCCAAGGGTGGCTCTCCAAGAGCCTATGTTGCAGCCTACAAGgaagggagtccaaaaaacccaacaTGCTGGCTGGGAACAATCGATCTTGAATGCACCGACGCAGATATCATGGAAGCTTTTGAGGATGCTATAAGTGATAGGGTTGATGTAATTTCTTGTTCCCTAGGGCAGCCTACTCCAACAGAATTTTTTGAAGATGGGATTTCCATAGGGGCCTCCCATGCAATTGTTAATGATAGAATAATGCTTACTGGTGGTGGCAATGCAGGACCAGAACCTGGAACTGGAGCTAGTCTTTCTACAGGCTTGCCATATAAGAAGTTCTATTCTTTGATCAATTCTATAGATGCTAAAGTTGCTAATGCAACAATTGAAGATGCTCAACTATGTAAGGCTGGAACTATTGATCCTAAGAAGGCAAAGGGAAAAATCTTGGTTTGCCTCCTAAAAAAGGAGGTTGATGGATTAAGTTATGCAGAGGGGAGCCCCATGGCTTACATGACCAGAGCAAAAACTCTATTAGGACTGAAACCTGCTCCAGTAATTGCTTCATTATCATCTAAGGGACCTAACCCCATCCAACTATCAATCCTTAAGCCTGACATCACTGCACCAGGTGTGGACATTCTTTATGCATGGTCCAAAGTCTTTAGTCCAACTGGTTTTGCATCAGATAATCGGCGGATTCTGTATAATAAGGGTAGCCAAAGGACAAGAATAGCCTCGAACATATTTAAAAATACAAAGGGTTATCCCTATAAAACCCTAGATACATTACTGAAAACCCTGAGAGTGAAACTGCGTCAAACCCTCTCCTCGCCGTCATCGCCGCAGCATTGGCCACCATCAGTTTCTCCGGCTACGTGTTGCAGAATGGAGTCAAATCAGGCAGCTTCTTCTATGGAAGTTGAGACTGTCCCATCTGAAGCCAAACTTTTGCCACCAAAGCCAAAGTTTGAGCCTTTGAAGCCTCATGAGATGTCTGATGGTCAGGTACAGTTCCGCAAGGTGAATGTTCCACCTCATCGTTATACCCCTCTCAAGAAAGCTTGGATGGACATCTATACTCCCATATATGAACAGATGAAAATTGATGTTCGTATGAATTTGAAGGCTCGTAGAGTGGAGCTGAAGACAAGGCCTGATACACCTGATATTAGTAACCTGCAAAAATGTGCTGATTTTGTCCATGCTTTCATGCTGGGTTTTGATGTCATAGATGCCATTGCTCTTTTGCGTTTGGATGAGCTCTACATCGAGTCCTTTGAGATCAAGGATGTTAAAACTCTTCGAGGCGATCACTTGTCTCGTGCTATTGGAAGGTTATCTGGTAAAGGTGGTAAAACAAAGTTCGCAATTGAGAATGCATCAAAGACAAGGATTGTGATTGCTGACACCAAAATTCACATATTGGGATCTTTTGCCAACATAAAGATTGCCAGGGACTCTCTCTGTAGCCTGATCCTGGGATCACCCGCAGGAAAGGTGTATTCAAAACTTAGAGCAGTTACTGCCAGATTGGCAGAAAGACACAATCTTCAGTTTTCATTCTTAACCTCATCTCTCACTCTCGACTCGTCTTCTCGCGCCGCCGCCGCCGCCGCCACCGCACACCGCTTCCATCGGCGCCATCGTAACCGTCTCTTTCTTCACTTGCAGAATGGAGTCAAATCAGGCAGCTTCTTCCATGGAAGTTGA 1872 0.438 MCPVPSRWRGICQLDNFICNRKLIGARFFSNGYESKFGKLNKTLYTARDLFGHGNGTAKGGSPRAYVAAYKEGSPKNPTCWLGTIDLECTDADIMEAFEDAISDRVDVISCSLGQPTPTEFFEDGISIGASHAIVNDRIMLTGGGNAGPEPGTGASLSTGLPYKKFYSLINSIDAKVANATIEDAQLCKAGTIDPKKAKGKILVCLLKKEVDGLSYAEGSPMAYMTRAKTLLGLKPAPVIASLSSKGPNPIQLSILKPDITAPGVDILYAWSKVFSPTGFASDNRRILYNKGSQRTRIASNIFKNTKGYPYKTLDTLLKTLRVKLRQTLSSPSSPQHWPPSVSPATCCRMESNQAASSMEVETVPSEAKLLPPKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKKAWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERHNLQFSFLTSSLTLDSSSRAAAAAATAHRFHRRHRNRLFLHLQNGVKSGSFFHGS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00677 623 SUPERFAMILY Subtilisin-like 15 281 IPR036852 GO:0004252|GO:0006508
Gma18g00677 623 SMART kh_6 474 547 IPR004087 GO:0003676
Gma18g00677 623 Pfam Subtilase family 86 279 IPR000209 GO:0006508|GO:0008236
Gma18g00677 623 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 474 568 IPR036612 GO:0003723
Gma18g00677 623 Gene3D - 216 232 - -
Gma18g00677 623 Gene3D Peptidase S8/S53 domain 49 156 IPR036852 GO:0004252|GO:0006508
Gma18g00677 623 Gene3D Peptidase S8/S53 domain 233 281 IPR036852 GO:0004252|GO:0006508
Gma18g00677 623 CDD KH-I 494 540 - -
Gma18g00677 623 Gene3D K Homology domain, type 1 473 575 IPR036612 GO:0003723
Gma18g00677 623 PANTHER RNA-BINDING PROTEIN PNO1 354 568 IPR039912 -
Gma18g00677 623 PANTHER RIBONUCLEASE Y 354 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00677 Gma-Chr18 6880166 6892380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00677 1 290 Subtilisin-like Serine Gene Family AT2G04160 39.141 5.04e-71 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00677 K11884 - gmx:100788055 422.165