Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00673 ATGGCGCCAGCGCTGAACCTCGCCGCCGGAGGAATTCCGCTGAGTTTCTCTTCCTCCGTCGACCGCTCCGCCAGCTTTCCACGGCGGTCCTCGGTCCGCGCCGTCGCGGCTGAGGCGGTGGATACGCAGCGGCCGGCGGCGAGCCTTTACGAGGTGCTGCGAGTCGAGCGAGACGCATCGCCGACGGAGATCAAGTCGGCGTACCGGAGCCTCGCGAAGCTCTACCATCCCGATGCGGCGGTGCAGAGGTCACCGGAGACTGACGGCGACGGAGACTTCATTCAGCTCCGAAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAGGGCGATGTACGATAGGACGCTGGCGGCGGCGCACGGCGGAAGACACCGCCGGTTTTCTACTTCGCTTAGTCGGAACCACTCGTCGGCGTTTTACACGACGCGAAGGTGGGAAACGGACCAATGCTGGTAG 456 0.6535 MAPALNLAAGGIPLSFSSSVDRSASFPRRSSVRAVAAEAVDTQRPAASLYEVLRVERDASPTEIKSAYRSLAKLYHPDAAVQRSPETDGDGDFIQLRNAYETLSDPSARAMYDRTLAAAHGGRHRRFSTSLSRNHSSAFYTTRRWETDQCW 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00673 151 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
Gma18g00673 151 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 151 - -
Gma18g00673 151 CDD DnaJ 50 105 IPR001623 -
Gma18g00673 151 Gene3D DnaJ domain 34 137 IPR036869 -
Gma18g00673 151 SMART dnaj_3 47 108 IPR001623 -
Gma18g00673 151 PRINTS DnaJ domain signature 50 68 IPR001623 -
Gma18g00673 151 PRINTS DnaJ domain signature 68 83 IPR001623 -
Gma18g00673 151 PRINTS DnaJ domain signature 88 108 IPR001623 -
Gma18g00673 151 ProSiteProfiles dnaJ domain profile. 48 116 IPR001623 -
Gma18g00673 151 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 151 - -
Gma18g00673 151 Pfam DnaJ domain 49 113 IPR001623 -
Gma18g00673 151 SUPERFAMILY Chaperone J-domain 47 124 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00673 Gma-Chr18 6844396 6845273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00673 50 113 C2H2 Transcription Factor Family AT1G74250 45.455 1.15e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00673 - - gmx:100778445 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00673 18 6844396 6845273 Gma18g00673 18 6844396 6845273 ECH
Gma18g00673 18 6844396 6845273 Gma08g03127 08 47980911 47981837 GST
Gma18g00673 18 6844396 6845273 Gma14g00102 14 846092 848706 PCT
Gma14g00102 14 846092 848706 Gma18g00673 18 6844396 6845273 PCT