Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00645 ATGGACTTCTCAGTTGTCTTCTTGGGTCTGTTATGGGACATGTTACAGCTGGTGTTGCCATCCCTTGAAAACTCCATATTTGCACCTAAAGATTATTCGAGTTCACAATTCAGAGGCCTTAAGGTTGTGTTAACCGAGGATGATGGTGTAAACAGGACCGTGACCAAGAAGCTACTTGAGAAGCTTGGTTGTCAAGTAATTTCTGTTTCATCAGGGTTGGAGTGCCTGAGTGCTATAAGTGGTGCTAGTAACTCATTCAGAATTATCCTGTTGGATCTTCGCATGTCCGAAATGGATGGCTTTGAAGTGGCAAAGAGAATCCGGAGGTTCCATAGCCATAGTTGGCCCTTGATTATAGCTCTTATAGCAAGCGCAGAAGAACATGTGAGGGAGAAATGCCTACTTGCAGGAATGAATGGATTGATCCAAAAACCTATCGTACTTCATCAGATAGCAGATGAACTTAGAACAATCCTACAAAGAGCAGGTGAAAGCACAGTTTTTGAAAGCATGCTTGGGTTTAAGAAAATATGA 534 0.4232 MDFSVVFLGLLWDMLQLVLPSLENSIFAPKDYSSSQFRGLKVVLTEDDGVNRTVTKKLLEKLGCQVISVSSGLECLSAISGASNSFRIILLDLRMSEMDGFEVAKRIRRFHSHSWPLIIALIASAEEHVREKCLLAGMNGLIQKPIVLHQIADELRTILQRAGESTVFESMLGFKKI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00645 177 ProSiteProfiles Response regulatory domain profile. 41 159 IPR001789 GO:0000160
Gma18g00645 177 Pfam Response regulator receiver domain 42 154 IPR001789 GO:0000160
Gma18g00645 177 CDD REC_ETR-like 40 155 - -
Gma18g00645 177 SUPERFAMILY CheY-like 36 161 IPR011006 -
Gma18g00645 177 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 160 - -
Gma18g00645 177 PANTHER ETHYLENE RECEPTOR 18 160 - -
Gma18g00645 177 Gene3D - 40 171 - -
Gma18g00645 177 SMART REC_2 40 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00645 Gma-Chr18 6557057 6557590 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00645 15 164 Miscellaneous Gene Families AT3G04580 58.385 2.95e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma18g00645 Response_reg 1e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00645 K14509 - gmx:100101892 263.462