Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00634 ATGGACGAATCTAGTAAGCCTCCAAAGAACCACAACCTCACGCTTCTCCCTCTATATAAACCTCTTCACCCTCGCCACGTTTGTTTTCCCTTAACGCAAACTGTCATCTTGTCATTCACCGAGAAAGTCGTACTGATTCCTCTTCATCTTTCGTTAAAGCGAGTACTTTTCGTTCTTGATCTGTTGGTTACGATGTCGTATTCAAGGAGATCTAGGTATTCTCCTTCTCCTTCTCCTTCTCCATACAAGCGATACGGTAGGTCTGTGTCCAGGTCTCTCTCAATATCAAGATCCAGAAGCCGTTCAAGGAGTTTATCAAGAGATGCAGAAAATCCAGGAAACAATTTGTATGTGACAGGATTGTCTCCTAGGATTACCAAGAGAGAACTGGAGAAACATTTTGCTGCTGAAGGAAAAGTGATAGATGTCCATCTGGTAGTTGATCCTTGGACAAGGGAATCCCGTGGGTTTGGCTTTGTGACAATGGAGACTCTTGAGGAGGCTGAACGATGTGTAAAGTATCTGAATCGCTCTGTACTTGAAGGGCGTGTCATCACGGTGGAGAAGGCTAAAAGACGACGTGGTCGAACCCCAACGCCAGGGAGGTATCTAGGACTGAGAACTATTCGTGCTCGACGTCGCTCTCCAAGTTACTCTCCTCGTCGCTCTCCTAGCTATTCTCCCTTCAGAAGAAGCTACAGTCGCTCTCCCTATTCTTCAGACCGAAGTAGGAGTCGTTCTTACTCTCCTGACTATCAGAGGAGGAGGTCTTACTCTCCATATCACTCCAGGCGGAGGTCTTACTCTCCATTCTATAGCCGGTACAGGTCCTATTCTCGATATGATCGACACAGGTCATATTCTCGATCTCGCTCTCCGTATAGCAGGTCACCTGTCAGCATGCATGACAGATCATACTCTCCCTATGAAATACGATATGACTCGCCGGATGCGCACTCCTACAGAAGGCACCGTTACCGATCTGTTTCACGAAGTGCCTCGCCTGATGATCCTTATTATGGAAGGCACCGTTACAGGTCTGTTTCTCGGAGTGCCTCACCCAGGCCAAGGAGAAGGTCAAGGAGGAGCCATTCAAGAAGCTCTAAGAGGAGTGGCAAATGTGAGAAACGCTACTCAAGAAGCTCGAGTGTGAATGCAAGTTCAAGATCAGTATCGAGGTCAAATACTCCAAGagcttctacgactccttttgcatcatctctatatcaacaaaGCGTGACAGTTGACATGGACCGGAAAAATCTCTAG 1269 0.4586 MDESSKPPKNHNLTLLPLYKPLHPRHVCFPLTQTVILSFTEKVVLIPLHLSLKRVLFVLDLLVTMSYSRRSRYSPSPSPSPYKRYGRSVSRSLSISRSRSRSRSLSRDAENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAERCVKYLNRSVLEGRVITVEKAKRRRGRTPTPGRYLGLRTIRARRRSPSYSPRRSPSYSPFRRSYSRSPYSSDRSRSRSYSPDYQRRRSYSPYHSRRRSYSPFYSRYRSYSRYDRHRSYSRSRSPYSRSPVSMHDRSYSPYEIRYDSPDAHSYRRHRYRSVSRSASPDDPYYGRHRYRSVSRSASPRPRRRSRRSHSRSSKRSGKCEKRYSRSSSVNASSRSVSRSNTPRASTTPFASSLYQQSVTVDMDRKNL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00634 422 MobiDBLite consensus disorder prediction 322 405 - -
Gma18g00634 422 PANTHER TRANSFORMER-2-RELATED 73 337 - -
Gma18g00634 422 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 114 192 IPR000504 GO:0003723
Gma18g00634 422 MobiDBLite consensus disorder prediction 348 371 - -
Gma18g00634 422 SMART rrm1_1 115 188 IPR000504 GO:0003723
Gma18g00634 422 MobiDBLite consensus disorder prediction 218 256 - -
Gma18g00634 422 MobiDBLite consensus disorder prediction 70 100 - -
Gma18g00634 422 MobiDBLite consensus disorder prediction 281 303 - -
Gma18g00634 422 MobiDBLite consensus disorder prediction 378 405 - -
Gma18g00634 422 MobiDBLite consensus disorder prediction 70 113 - -
Gma18g00634 422 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SR45A-LIKE ISOFORM X1 73 337 - -
Gma18g00634 422 Gene3D - 67 198 IPR012677 -
Gma18g00634 422 CDD RRM_RBMX_like 113 192 - -
Gma18g00634 422 SUPERFAMILY RNA-binding domain, RBD 105 217 IPR035979 GO:0003676
Gma18g00634 422 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 185 IPR000504 GO:0003723
Gma18g00634 422 MobiDBLite consensus disorder prediction 190 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00634 Gma-Chr18 6304160 6311089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00634 115 229 Eukaryotic Initiation Factors Gene Family AT2G36660 32.174 8.49e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00634 - - gmx:100808038 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00634 18 6304160 6311089 Gma18g00634 18 6304160 6311089 ECH
Gma18g00634 18 6304160 6311089 Gma08g03098 08 47719464 47723836 GST