Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00629 ATGCCAGTCATCGCCGCCAAGCGCACGTTGCGATCTCACCCTTCCTCGCCCCCTCGCAAATCTCCCCGCCGATGCACAGCCGCAACCCCCAATTCCACCCCTACGGTAATTCCCAGAAACCCTACTTCCCCTGCGACCACTCTCTCCTCTCTTTCAATACCCCTAATTAATTTATTTCTGTTCATTCATTTGCAGAAAAACAGATTGGGTGGCGCCGACGAAAACCAAGCTGATCCGGCAGCTGTGAAACCCAAGTGGAATCCCAAAGATGGTGAGCAATTGAAGAGGGCAAAAATGGCACTGCACTTGTCCACTGCACCGTCTTCGGTTGTGTGCCGCGAGGAGGAGCAGAATATGGTTTTGGAGTTCTGCAAGGGGTGCGTTGAGCACCAGAAGGCTGGGAGTCTCTACATATGCGGGTGTCCCGGAACCGGGAAATCATTATCTATGGAGAAAGTGAAAGATAAATTACTCAATTGGGCTAAGGAGGAAGGTCTTCCACTGCCAGATGTTTTGTCTGTAAATTGTACAACCCTTACCAATACATCAGATATTTTCACTAAGATACTTGGGTTAAACCAAACACAGGGTAAAAAGGTTTCAGCCTTGCCCTTGCAGCAGCTTCAGAACATGTATTCTCAGAAATCATCTGTCAAGAACATGACATTGATAGTAGCTGATGAATTAGATTATTTGATAACCAAAGACAGAGCCGTGCTCCATGATCTTTTCATGCTCACCACCTTTCCTTTTTCTAGATGTATATTAATAGGTGTAGCGAATGCAATTGATCTAGCTGATCGATTTCTTCCAAGGCTTACATCATTGAATTGCAAACCTATTGTTGTAAATTTTCGGGCTTACTCTAAAGATCAGATCCTCAAGATTCTTGAAGAAAGGTTAAATGAATTTCCTTACAGTGTTTTCCAACAGCAAGCCCTGGAACTATGTGCTAGGAAAGTAGCTGCAACTTCTGGAGACATGCGGAATGCTCTTTGTATATGCGGGAGTGCAATAGAGATGCTTGAAGCAGAAATTAGAGAATCTGCCTGCAATTTGAATACCTCATTGGAAGAGATATCATCCTCAAGACAAAATTTTGCAACAGCTCCTGATTTTATGAAAAAACGAGAATTTGATACTGTAAAGACTGATCATATGGCTCGTGCCTTGTCCAAGACATATAGATCACCAGTGGTGGATACAATACAATCTCTGCCACATCATCAGCAGATTGTACTCTGCTCTTCTATGAAACATTTTCGTGGAGCCAAGAAAGATGCAATCCTTGGAGAGTTGTATAAATCGTATGTGGGGGTATGCAAATCTTGTTTAATTCCTCCAGCGGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTAAATGACCAGGGCCTTATTAAACTTGGACAATCTCGAGAGGATAAATTGAGAAGAGTGTCACCTAAAATAGACGAGGGTGATATTACGTTTGCATTGCAGGGAATACGACTCTTCTTTAGATTAAGATAA 1512 0.4299 MPVIAAKRTLRSHPSSPPRKSPRRCTAATPNSTPTVIPRNPTSPATTLSSLSIPLINLFLFIHLQKNRLGGADENQADPAAVKPKWNPKDGEQLKRAKMALHLSTAPSSVVCREEEQNMVLEFCKGCVEHQKAGSLYICGCPGTGKSLSMEKVKDKLLNWAKEEGLPLPDVLSVNCTTLTNTSDIFTKILGLNQTQGKKVSALPLQQLQNMYSQKSSVKNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPIVVNFRAYSKDQILKILEERLNEFPYSVFQQQALELCARKVAATSGDMRNALCICGSAIEMLEAEIRESACNLNTSLEEISSSRQNFATAPDFMKKREFDTVKTDHMARALSKTYRSPVVDTIQSLPHHQQIVLCSSMKHFRGAKKDAILGELYKSYVGVCKSCLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVSPKIDEGDITFALQGIRLFFRLR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00629 503 PIRSF Cdc6 63 502 IPR016314 GO:0006270|GO:0051301
Gma18g00629 503 Coils Coil 339 359 - -
Gma18g00629 503 MobiDBLite consensus disorder prediction 25 44 - -
Gma18g00629 503 Gene3D - 403 489 IPR036388 -
Gma18g00629 503 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 15 501 - -
Gma18g00629 503 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 15 501 - -
Gma18g00629 503 SMART Cdc6_C_2 414 493 IPR015163 -
Gma18g00629 503 Gene3D - 279 402 - -
Gma18g00629 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 348 IPR027417 -
Gma18g00629 503 CDD AAA 116 274 - -
Gma18g00629 503 Gene3D - 90 278 IPR027417 -
Gma18g00629 503 Pfam AAA domain 131 248 IPR003593 -
Gma18g00629 503 SUPERFAMILY "Winged helix" DNA-binding domain 399 498 IPR036390 -
Gma18g00629 503 Pfam CDC6, C terminal winged helix domain 414 492 IPR015163 -
Gma18g00629 503 MobiDBLite consensus disorder prediction 1 44 - -
Gma18g00629 503 CDD Cdc6_C 407 489 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00629 Gma-Chr18 6233735 6238661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00629 20 501 Core DNA Replication Machinery Family AT2G29680 57.407 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00629 K02213 - gmx:100787371 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00629 18 6233735 6238661 Gma18g00629 18 6233735 6238661 ECH
Gma18g00629 18 6233735 6238661 Gma08g03096 08 47682067 47687182 GST