Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00624 ATGAAAAGCATAGGAGGCGGAGGTGGTGATGGTGGTGCCATTATTCCACTTCATCATGGATGTGGAAATATAAGGGTCACTACTACTAACCCTTCCATGTGTTCAGTTGGTCCTCCTTTCACAGCCATAGAAAGGTTTTTGTGGGGACAACAGCAACAGACACAGTATAACGTAGCAAACAATGGCCATGCAAGTATTTTTGGTGGTTCAACCTACAAGTTTATGTGGCCTAATAATAATAGTACTACTCAAGAAGTGAGCTATGCTGAACAGATCATTTTTGCAAATAATAATGAAGAGGCTCTGAATTGGTCACAACAAGTGTGCTTCAAAGAAGATGGGAAGAATATTGCCAAAGTGGTGGGAAGAAGACCTAAGAAAGGGTCTTCTGTGCCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAACTGTTGAAGTTGGTGAAACAACATGGTGTAAGAAAATGGTCTCTGATAGCCGAGAAGTTGGATGGAAGGGCTGGAAAGCAGTGTCGAGAGAGATGGCATAATCATCTGCGGCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATATTAGTAGAAACTCATGCCAAGATTGGAAACCGTTGGGCAGAGATTGCGAAGTGCATTCCCGGAAGAACAGAAAATGCAATAAAGAACCATTGGAATGCAACAAAAAGGAGGCAAAACTCAAGGAGAAAGAACAAAAGAGCAGGAACCTCAAATGGGAAGCCACAACCCTCTATTCTCCAAGACTACATCAAAAGCTTGACTCTGATCACCAGCACCACCACCTCTCCCGTGGAACAACAAATTGCACCTCAGCTCTCTAATTCTGTTACCAATAATGAAAATTCTTCACTAATGGCTGAGTCTTATGATGATGAGTTGCTATTCATGCAACAACTTTTCAAGGAGAATAATGCCAATAATGTTGAATCTCTTAAGCACTCCAAGAATATTATCAATAACTCTTCTGCAGCCTCCTTGGATTGTTATTATCATCAAACTAATTACAATGGTGGTGGTCAGCTTCTCACTGATGTCACTCAATGTGGGTTTGTTGTTCATTCCAACCCTAACACAACAAACTCACATCACAACAACATGTGCTTGGATGAGAGTCTCTTCATCTCTAGAAAGAGTACTACTCCTCATGCTCCTATCAACTACCTTGATTCCGATCATGTCTATCTCTCTCACTTGCTTAATGGAACTGCTGGTTCATCATTTTGCTATAATAATTATGGGGTTCACAACCAGAACAACATGGAGTTGCAGCTGGGGAATCAAGATTGTTTTGAGGAAAGAGGGAGATGGATATGGTAG 1347 0.4135 MKSIGGGGGDGGAIIPLHHGCGNIRVTTTNPSMCSVGPPFTAIERFLWGQQQQTQYNVANNGHASIFGGSTYKFMWPNNNSTTQEVSYAEQIIFANNNEEALNWSQQVCFKEDGKNIAKVVGRRPKKGSSVPLIKGQWTDEEDRKLLKLVKQHGVRKWSLIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKIGNRWAEIAKCIPGRTENAIKNHWNATKRRQNSRRKNKRAGTSNGKPQPSILQDYIKSLTLITSTTTSPVEQQIAPQLSNSVTNNENSSLMAESYDDELLFMQQLFKENNANNVESLKHSKNIINNSSAASLDCYYHQTNYNGGGQLLTDVTQCGFVVHSNPNTTNSHHNNMCLDESLFISRKSTTPHAPINYLDSDHVYLSHLLNGTAGSSFCYNNYGVHNQNNMELQLGNQDCFEERGRWIW 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00624 448 ProSiteProfiles Myb-like domain profile. 135 181 IPR001005 -
Gma18g00624 448 CDD SANT 138 181 IPR001005 -
Gma18g00624 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 185 IPR017930 -
Gma18g00624 448 PANTHER MYB DOMAIN PROTEIN 64-RELATED 60 330 - -
Gma18g00624 448 Pfam Myb-like DNA-binding domain 138 195 - -
Gma18g00624 448 SMART sant 186 234 IPR001005 -
Gma18g00624 448 SMART sant 134 183 IPR001005 -
Gma18g00624 448 MobiDBLite consensus disorder prediction 231 245 - -
Gma18g00624 448 SUPERFAMILY Homeodomain-like 132 228 IPR009057 -
Gma18g00624 448 MobiDBLite consensus disorder prediction 224 253 - -
Gma18g00624 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 236 IPR017930 -
Gma18g00624 448 PANTHER MYB PROTEIN-RELATED 60 330 - -
Gma18g00624 448 Gene3D - 189 249 - -
Gma18g00624 448 CDD SANT 189 232 IPR001005 -
Gma18g00624 448 Gene3D - 134 186 - -
Gma18g00624 448 ProSiteProfiles Myb-like domain profile. 182 232 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00624 Gma-Chr18 6160576 6163022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00624 36 415 MYB Transcription Factor Family AT5G58850 41.337 1.90e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma18g00624 Myb_DNA-bind_6 3.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00624 K09422 - gmx:100786295 888.641