Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00621 ATGAGTGGCAGAGCCATTATCTCCTGTTTCTCTCCTCCTTCAACAACTCCATGCTCTGCCCCCATTCCAGTACTCTCGCGCCGAAACCACCTCCTCCATGCAACTCCACCTTCGCCACACCTCCTCTCGCGGCGGAGCCACCTCGTTGTTGCCGGCGGCGGCGGCGGGAAGACGTGGGCAAATGTGAAGTCCGAGAAGAACGTGTCCGAGTCCCCCAAGTACGAGGATGATGCCGTGGTTCAGAAGGCACGTGATTTGGATAACGTGGAAGAGGAAGCCAGGTGGTGGCAAGTGTTCCCCAAGAGATGGGTCATTGTGGTTCTCTGCTTCTCAGCTTTTCTTCTATGTAACATGGATAGGGTAAATATGAGCATTGCTATACTTCCTATGTCTGCAGAGTACAACTGGAACCCGAGCACTGTAGGTTTAATACAGTCTTCTTTCTTTTGGGGATACCTCCTCACTCAGATTGCTGGTGGAATATGGGCAGACACAGTGGGAGGAAAGCAGGTATTGGGATTTGGTGTGGTTTGGTGGTCTGTTGCGACAGCCCTCACTCCTATAGCTGCCAAACTTGGATTGCCTTTCCTACTAGTTGCTCGTGCATTCATGGGGATTGGTGAAGGTGTTGCTATGCCAGCCATGAATAATATTTTGTCAAAATGGGTTCCTGTGTCAGAGCGAAGTAGATCACTAGCGCTGGTCTACAGTGGCATGTATCTTGGATCAGTCACTGGACTGGCCTTTTCTCCCTTCCTAATTCATCAGTTTGGATGGCCATCAGTATTTTACTCCTTTGGTTCTCTAGGGACAGTCTGGTTTTCTGTGTGGCTTAGCAAGGCACATAGTTCACCTCTTGAAGATCCTGAACTGCGGCCCGAGGAAAAGAAGCTCATTACTACCAACTGTTCCTCCAAGGAACCTGTGAAAACAATACCTTGGAGATTAATTTTGTCAAAGCCGCCAGTCTGGGCTCTGATAGTGTCCCATTTTTGCCACAACTGGGGAACTTTCATTCTACTTACATGGATGCCAACATACTATAACCAAGTCTTGAAGTTTAATCTTACAGAATCTGGGCTATTTTGTGTTTTACCATGGTTGATAATGGCTATTTCTGCAAATGTTGGTGGTTGGATTGCAGACACTCTAGTGAGCAAGGGTGTATCAGTTACAAGGGTCCGCAAGATAATGCAAACAATTGGATTTCTCGGACCAGCTTTCTTCTTAACTCAATTGAGCCATGTCAATTCTCCGGTGATGGCTGTTTTGTGTATGACGTGCAGCCAGGGAACTGATGCTTTCTCTCAGTCCGGATTGTATTCAAACCATCAAGATATCGCCCCTCGATATTCTGGCATATTGCTTGGTCTATCTAATACCGCTGGAGTATTGGCTGGTGTCTTTGGAACAGCAGCAACAGGTTACATTCTACAACATGGCTCCTGGGATGATGTTTTCAAGGTTTCAGTTGTGTTGTATTTGGTTGGAACTGTGGTGTTTAATCTTTTTTCAACTGGTGAAAAGGTCTTGGAATAA 1539 0.4685 MSGRAIISCFSPPSTTPCSAPIPVLSRRNHLLHATPPSPHLLSRRSHLVVAGGGGGKTWANVKSEKNVSESPKYEDDAVVQKARDLDNVEEEARWWQVFPKRWVIVVLCFSAFLLCNMDRVNMSIAILPMSAEYNWNPSTVGLIQSSFFWGYLLTQIAGGIWADTVGGKQVLGFGVVWWSVATALTPIAAKLGLPFLLVARAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWFSVWLSKAHSSPLEDPELRPEEKKLITTNCSSKEPVKTIPWRLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLIMAISANVGGWIADTLVSKGVSVTRVRKIMQTIGFLGPAFFLTQLSHVNSPVMAVLCMTCSQGTDAFSQSGLYSNHQDIAPRYSGILLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYLVGTVVFNLFSTGEKVLE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00621 512 SUPERFAMILY MFS general substrate transporter 87 504 IPR036259 -
Gma18g00621 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 105 509 IPR020846 GO:0022857
Gma18g00621 512 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 87 512 - -
Gma18g00621 512 Gene3D MFS general substrate transporter like domains 309 510 IPR036259 -
Gma18g00621 512 Pfam Major Facilitator Superfamily 109 470 IPR011701 GO:0022857|GO:0055085
Gma18g00621 512 Gene3D MFS general substrate transporter like domains 100 289 IPR036259 -
Gma18g00621 512 CDD MFS_SLC17A9_like 106 505 IPR044777 -
Gma18g00621 512 PANTHER SOLUTE CARRIER FAMILY 17 87 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00621 Gma-Chr18 6106432 6115150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00621 57 512 Organic Solute Cotransporters AT4G00370 76.805 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00621 K08193 - gmx:100792104 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00621 18 6106432 6115150 Gma18g00621 18 6106432 6115150 ECH
Gma18g00621 18 6106432 6115150 Gma11g01995 11 33092917 33093828 GST
Gma14g01900 14 49648446 49654358 Gma18g00621 18 6106432 6115150 PCT
Gma02g02123 02 47057180 47062044 Gma18g00621 18 6106432 6115150 PCT