Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00591 ATGGCGAAAACGACGTCGTTGCTGCTCTTTACACTGCTCCTCTTCGGAACCCTAGCTCTCATCCAGGCGAAGAAATCGAAGGAGGATTTGAAGGAGGTGACCCACAAGGTTTACTTTGATGTTGAGATTAATGGAAAAGAAGCAGGTCGTATTGTAATGGGTCTTTATGGGAAGGCTGTTCCAAAAACTGCAGAAAACTTCCGAGCACTTTGCACAGGGGAAAAGGGAACTGGTAAAAGTGGAAAGCCTCTCCATTACAAAGGTAGCTCATTCCATAGAATTATTCCTAGCTTTATGCTTCAAGGAGGTGATTTTACACAAGGAAATGGAATGGGTGGAGAATCAATTTACGGAGAGAAGTTTGCTGATGAGAACTTCAAGTTAAAGCATACTGGACCAGGACTTCTATCAATGGCAAATGCTGGTCCTAATACCAATGGTTCACAATTTTTCATTACAACTGTGACAACTAGCTGGTTGGACGGAAGGCATGTTGTTTTTGGTAAAGTTCTTTCTGGAATGGATGTTGTTTACAAGATTGAAGCTGAAGGAACACAAAGTGGCACTCCCAAGAGCAAGGTTGTGATTGTTGACAGTGGTGAACTCCCTCTATAA 615 0.426 MAKTTSLLLFTLLLFGTLALIQAKKSKEDLKEVTHKVYFDVEINGKEAGRIVMGLYGKAVPKTAENFRALCTGEKGTGKSGKPLHYKGSSFHRIIPSFMLQGGDFTQGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPNTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGTQSGTPKSKVVIVDSGELPL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00591 204 CDD cyclophilin_ABH_like 35 200 - -
Gma18g00591 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 12 204 - -
Gma18g00591 204 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 39 199 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 SUPERFAMILY Cyclophilin-like 33 202 IPR029000 -
Gma18g00591 204 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 38 201 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 Gene3D - 22 203 IPR029000 -
Gma18g00591 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 70 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 103 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 161 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 177 IPR002130 GO:0000413|GO:0003755
Gma18g00591 204 PIRSF Peptidylpro_ismrse 19 203 IPR024936 GO:0003755
Gma18g00591 204 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 86 103 IPR020892 GO:0003755|GO:0006457
Gma18g00591 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-1 12 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00591 Gma-Chr18 5824198 5826855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00591 49 199 U-box Gene Family AT5G67530 41.830 4.42e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00591 K01802 - gmx:100305485 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00591 18 5824198 5826855 Gma18g00591 18 5824198 5826855 ECH
Gma18g00591 18 5824198 5826855 Gma11g01952 11 25148228 25162043 GST