Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00559 ATGGAAGAACGGTGGAGATTCATCACTTGGTTGAAGCTCTTCCGCGTGTTTGTGGCTGTTGTGTCTCTATTCCTGTTCATCTTGGAACCTATTTGGTGTTCGACTCTCAACAACGAAGGGTTGGCTCTACAAAAGATGAGGGAGAGGGTGGTGAGAGATCCATTGGGTGCTTTATCAAGTTGGAATAGCAAAGGAGAGATTGATCCCTGTTCCTGGTTTGGAGTAGAGTGCTCCCACGGCAATGTTGTATCCTTGAACTTGAAAGATCTATGTCTTCACGGAACACTAGCACTTGAAATTGGGAAGCTGGTTCACATTAAATCAATCATTTTGCGCAACAATTATTTCTACGGAGACATCCCTAAGGAAATACTACAATTAGAGGACCTGGAAGTTCTTGACTTAGGATATAACAACTTTAGTGGACAATTTCCATTTCATGACCTTGCAACCTATCCATCCCTGACTACCCTTTTATTGGACAACAATGACCATCTTGCCAGCTTAACTCCAGAAGTGTATGAGCTCAAGACATTTTCTGAATTGCATGTAGCTGAAGAACAACTAACTGGTGCCACCACTAGAGAAGCATGTGTTAGGATAACTAATAACTGGCACATTGGCACACATGGGGATATAGCATCCAGAAGGGCACTTCTCCAAGAAGCAAATGGTGAAAAGAGGGGTGATGATGACACAGAAACTCTTTCACCATCACCTTTTCCCTCTACACTATCACCATTTTCTGAGCCTTTCTCACCATCAGAGAGTCCCTCAGATTCACCAATATCATCTCCTGAAGTTTCCCCTTCACCATCCCCATCTCTCTCCAATTTCTTTTTCACTCTCTCACCCTCACCTTCACCTGAGGTAGCACCAACTCCAGACTTGTCACCTCCAGCAAATCCACCTATGGTTGTGTCCACACCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTTCAAACCAAGGGAATGCAAACAGTTCAAATCCAAAGCAACATACCGCGATTATTTGGTCCACAGTTGGGGGATTCTCCTTCTTGATTTTGGTTTCAGCCATTGCTTTTGTTTGCTTCAGAAGTAACAAGGTTGTAACTGTAAAACCTTGGACCACAGGGCTGAGTGGCCAGCTGCAGAAGGCATTTGTATCAGGTGTTCCGAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAAGATTTCAGCAACATTATTGGCTCACTTCCTGAGGGGACTATTTATAAGGGGACTCTCTCCAGCGGAGTTGAGATCGGTGTAGCATCCTCTGCAGTGACTTCATCCCAAAACTGGTCCAAAAACATGGAAACTCAGTTTCGGAAGAAGATAGAGATGTTGTCAAGAGTGAACCACAAGAATTTTGTAAATCTTATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACCCTATTTGAGCATCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTCTGGAGCACTTGCATCAGCTGACACCACCCATTGCCTACAGAAACATACTATCTTCCTCTATATACCTGACTGAAGATTACGCAGCTAAATTATCAGACCTTAGTTTCTGGACTGATATAGTCTCCACAAAGAAGGGTTCTGAAGCCCCACAGCTGTTGGAAACTCCTTCAGCATATATAAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTCGAATTAATTACTGGAAGAATTCCCTTTGCCGTGGAGAATGGCTTATTTGAAGATTGGGCGGAGGAATATATGAAGGGGCAACCATTGAGAGACTTGGTGGACACAAGCCTGAACTCTTTGCAAGCAAATGAAATTGAAAAATGGGAAGAAGTGGTCAAAAGCTGTGTGCATCCAGATCCAGAAAAAAGGCCAACTATGAGAGAGGTTACTGCTAAGTTGAAGGAAATCACCGCCATGGGGCCGGACGGAGCAACTCCGAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATTATGTCCAGTGACTTAAGTTTAGACGTTAAACCATGA 2100 0.4352 MEERWRFITWLKLFRVFVAVVSLFLFILEPIWCSTLNNEGLALQKMRERVVRDPLGALSSWNSKGEIDPCSWFGVECSHGNVVSLNLKDLCLHGTLALEIGKLVHIKSIILRNNYFYGDIPKEILQLEDLEVLDLGYNNFSGQFPFHDLATYPSLTTLLLDNNDHLASLTPEVYELKTFSELHVAEEQLTGATTREACVRITNNWHIGTHGDIASRRALLQEANGEKRGDDDTETLSPSPFPSTLSPFSEPFSPSESPSDSPISSPEVSPSPSPSLSNFFFTLSPSPSPEVAPTPDLSPPANPPMVVSTPPQSNWVSMPSPASSSNQGNANSSNPKQHTAIIWSTVGGFSFLILVSAIAFVCFRSNKVVTVKPWTTGLSGQLQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTIYKGTLSSGVEIGVASSAVTSSQNWSKNMETQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHLHQLTPPIAYRNILSSSIYLTEDYAAKLSDLSFWTDIVSTKKGSEAPQLLETPSAYIKANVYSFGVLLFELITGRIPFAVENGLFEDWAEEYMKGQPLRDLVDTSLNSLQANEIEKWEEVVKSCVHPDPEKRPTMREVTAKLKEITAMGPDGATPKASPLWWAEIEIMSSDLSLDVKP 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00559 699 ProSiteProfiles Protein kinase domain profile. 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00559 699 SUPERFAMILY L domain-like 38 193 - -
Gma18g00559 699 MobiDBLite consensus disorder prediction 236 271 - -
Gma18g00559 699 MobiDBLite consensus disorder prediction 308 335 - -
Gma18g00559 699 MobiDBLite consensus disorder prediction 224 271 - -
Gma18g00559 699 MobiDBLite consensus disorder prediction 288 307 - -
Gma18g00559 699 Gene3D Phosphorylase Kinase; domain 1 379 485 - -
Gma18g00559 699 PANTHER PROTEIN MALE DISCOVERER 2 1 691 - -
Gma18g00559 699 MobiDBLite consensus disorder prediction 286 335 - -
Gma18g00559 699 SUPERFAMILY Protein kinase-like (PK-like) 386 663 IPR011009 -
Gma18g00559 699 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Gma18g00559 699 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 691 - -
Gma18g00559 699 Gene3D Transferase(Phosphotransferase) domain 1 486 672 - -
Gma18g00559 699 Gene3D Ribonuclease Inhibitor 35 231 IPR032675 -
Gma18g00559 699 Pfam Protein tyrosine and serine/threonine kinase 407 663 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00559 Gma-Chr18 5340177 5348856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00559 382 666 Receptor kinase-like Gene Family AT1G69730 34.727 1.61e-41 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma18g00559 PK_Tyr_Ser-Thr 3.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00559 - - gmx:100814122 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00559 18 5340177 5348856 Gma18g00559 18 5340177 5348856 ECH
Gma18g00559 18 5340177 5348856 Gma11g01869 11 22092403 22098714 GST
Gma18g00559 18 5340177 5348856 Gma02g02170 02 47595518 47601858 PCT
Gma02g02170 02 47595518 47601858 Gma18g00559 18 5340177 5348856 PCT