Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00558 ATGAAAACCATTGTGGCTTCTTATAACATCACTCCAAATCAACCAACTCCAAAGGAGCCTTTATGGCTATCCGATAGTGATCAAATCGGGGTCCTAGGTCATGTATCCCTTCTCTACATTTACAAATCAGCAAAAAAACACAACACTGTTGAGAGAATGAACAACTCTCTTAGCAAGCTTTTATCTTACTACTATCCAGTAGCTGGCAGACTTGATGATACTAAACCCATAAAGGAGATTCCTCTATTGCTGGTGCAATTAACAAGGTTCCATGGTGGTGATCAAGGACTTGCCATTGGAGTTCTTCTATCTCATCCTTTGACCGATGCCACCGGCATCGTGGACTTCATGAACAGATGGGCAAAGTTGGCTCGAGGAGAAGAACTAGACCCTAATGAAATCCCATTTCTTGACCGAACACTACTCAAATTCCCACACATTCCATCATCAAAACTGCCAGATCGGTGGAAGCCTGTGCCACAATCACAAGTAGCAGGAAATGATGATGGAATAGATAAGCAAAAGAAGAGAAGTGACAGACTCAACTCAAGGGTAAAATAA 561 0.4207 MKTIVASYNITPNQPTPKEPLWLSDSDQIGVLGHVSLLYIYKSAKKHNTVERMNNSLSKLLSYYYPVAGRLDDTKPIKEIPLLLVQLTRFHGGDQGLAIGVLLSHPLTDATGIVDFMNRWAKLARGEELDPNEIPFLDRTLLKFPHIPSSKLPDRWKPVPQSQVAGNDDGIDKQKKRSDRLNSRVK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00558 186 Pfam Transferase family 75 172 - -
Gma18g00558 186 Pfam Transferase family 3 72 - -
Gma18g00558 186 Gene3D - 75 165 IPR023213 -
Gma18g00558 186 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 75 179 - -
Gma18g00558 186 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 72 - -
Gma18g00558 186 MobiDBLite consensus disorder prediction 169 186 - -
Gma18g00558 186 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 72 - -
Gma18g00558 186 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 75 179 - -
Gma18g00558 186 MobiDBLite consensus disorder prediction 149 186 - -
Gma18g00558 186 Gene3D - 3 74 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00558 Gma-Chr18 5328551 5329215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00558 7 153 Monolignol Biosynthesis Gene Families AT5G48930 27.751 3.46e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00558 K13065 - gmx:100804886 263.848