Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00557 ATGTCTATGGCTGGTGAGCAAGGTGATAGATGTTCCTCCATCACCATACCCCTTTTGGATGATGAAAAAGTGCACCAAGTGAATGGTTCAGAAGAGGCTTTGGTGGCCAAAACTTGTGATCTACACACAGCTCATGTGGGTAACACCTCCTTTTTCAAGACCTGCTTCCATCTAATTAATGCCCTCTCAGGAGTTGGTATTATTTCCATGCCTTATGCACTGGCATCTGGGGGATGGTTAAGCATATCACTACTATTTGTGATTGCCATTGCTTGCTGTTATACTGGTATGTTGGTCAAAAGATGCATGGATATGGACCCTGACATCAAGAATTTTCCTGACATAGGTCAACGTGCATTTGGAGACAAGGGGAGGATAATAGTATCAATTGCCATGAATTCTGAGCTCTTCCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGATAATCTCAACAAACTAGTACCAAACATGCAACTTGAACTTGCAGGGTTAACAATTGGTGGTACAACAATTTTTACCATGATTGCTGCCCTTGTTATTTTGCCTAGTGTTTTGTTAGAGGATTTGAGCATGCTGTCTTATGTCTCTGCTAGTGGGGCTTTGGCTTCTTCAATCTTCCTCCTCTCTATATTTTGGAATGGAACCATTGATGGCACTGGATTTCATGCAAAGGGAACAATTTTCAGATTGAGTGGAATACCTTCTGCTGTCAGCTTATATGCCTTCTGCTATAGTGCTCATCCTATCCTTCCCACTCTCTACAATTCTATGAGAGACAAAAGTCAGTTCTCTAGGGTTCTGTCTATATGCTTTTCAGTATGCACCCTTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTAATGTTTGGACAAGAGGTTGAATCACAAGTGACTTTGAACCTCCCAACAGGCAAGTTCAGTTCACATGTAGCAATATTCACTACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACCCCAGTCATTTATGCTGTAAAAAACAAGGTTTCATGGCATTACAACAAAAGGTCTACACATATGTTTGTTAGTACTTCCATGCTCATTAGCACTCTTATTGTAGCCGTGGCCATTCCCTTGTTTGGATATCTCATGTCACTCATTGGGGCATTGCTAAGTGTCTCAGCTTCAATTTTAGTGCCATCAGTGTGCTACTTGAAGATCTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAACTATTCAATAATAATAATGGGGGTCACTATTGCTGTAGTGGGTACTTATACATCTCTTGTAGATATAGTTCATAATTTGTAA 1314 0.4064 MSMAGEQGDRCSSITIPLLDDEKVHQVNGSEEALVAKTCDLHTAHVGNTSFFKTCFHLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIKNFPDIGQRAFGDKGRIIVSIAMNSELFLVVTGFLILEGDNLNKLVPNMQLELAGLTIGGTTIFTMIAALVILPSVLLEDLSMLSYVSASGALASSIFLLSIFWNGTIDGTGFHAKGTIFRLSGIPSAVSLYAFCYSAHPILPTLYNSMRDKSQFSRVLSICFSVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTGKFSSHVAIFTTLVNPITKYALMLTPVIYAVKNKVSWHYNKRSTHMFVSTSMLISTLIVAVAIPLFGYLMSLIGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIIMGVTIAVVGTYTSLVDIVHNL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00557 437 Pfam Transmembrane amino acid transporter protein 48 429 IPR013057 -
Gma18g00557 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 3 435 - -
Gma18g00557 437 PANTHER OS05G0424000 PROTEIN-RELATED 3 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00557 Gma-Chr18 5323486 5327652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00557 40 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.293 1.16e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00557 K15015 - gmx:100784690 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00557 18 5323486 5327652 Gma11g01867 11 21985803 21989278 GST