Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00554 ATGGCCGCAGCGTTGGAGTGCTGGTCGCGCCGCGCCACCACCACCGTCCACGAGGACCACGCGCTTCTCATGCAGCGACCCGAACAGGACACAACACCCAGAGACTCTTCTTCATCTTCTTCTTCTTCCCTCGTCCACAAGAAGCTTCAAAAACTCACGCGCAACGTCTCCGAAGCCATTGCTTCCCTCAAAAACTCCCTCAACAGCACCATCAACGTCGAATCCTCCAAACTCGACGGGCCTCGCAGCCTCGTGTGGACCACCGTCCTCCGCAACCTCACGCACCTCTACCCCGGTTCCCAGCTCCCGGAGAAGTTAGTCTGCAACATTCGCAAGCACTACGATTCCTTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAGGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTAGATGACGAGCAGGCTGCTATTTTGATTCAAGAGGAGTGTGATGGTGAGATTCAGCTTCAGGGGTCTGTGTTCAAGTTAACATTTGCTTGCAACTCCCCAATTTCGTGGCCTTTGATGTCAGGTGCGTTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATCTTTGAGAAGAAAGGTTTCACCCTTGGGATTGTGCTGCTTCTTGTTCTTTCTGGGGGTGGCCAAGATAAGTTGGTCAGGACCCGGGTTGAAAGCGCTCTCAAGATTGCCATGAAGAGGCTGAAAACCGGTGGCGTGAAGCTGCCCTTTGGGCTTTGTGGATGTCAAGAGGAGAACTCCAAGGGGAGAGGACTTGGAGAGATTGAAGAAGATGGAGGGGATGCATATTGTGGAAATGGATTTGAGAATTTAAGCCAAAATATTCAGCTTCATGTGCCATTGCCTAGTTCATCTTTTCTTGTAGTCATAGATGAGTGGCAGACTATTCAATCCGGTGGGGATGAGATTGAAAAATGGTTGTTGAACTCAGATAGTCTTGAGTTTGTAGAACAGATTGCGCCCAATTCGTATAAGGGGACGTACATGGGGAAAAGGGTTGGCATTGAGAAGCTTAGAGGGTGTGAGAAAGGGAACTCTTATGAGTTTGAGCTCAGGAAAGATCTGCTGGCACTGATGACTTGTGGGCATAGAAATATTATGCAGTTTTGTGGTGTTTGTGTAAATGACAACCATGGGTTATGTGTAGTGACAAAATTTGTTGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAACAAGAAGCTTTCGAGTAAGGATGTTGTAAGAATTGCAGCTGATGTAGCTGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCATACGGAGATCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGTGATATGGGCATTGTCACTGCCTGCAAGAGTGTCAGAGAGGCAATAGATTATGAAACTGATGGTTATCGATGGCTCGCACCAGAGATAATTGCTGGTGATCCAGAGAGTGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTAACCGGTGAGGCAGCATATTCTGCATTTTCACCAGTTCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGACAAAGTGTTGGAACAACACCCCTTCAAAACGCCCCCACTTTTCTGAAATTTTGGCCATATTGCTACGACCAAGCAACTACAATAGCATCCAATCAGAGGTTCCATTTCTCTTGATTCCCTCTCACCCAAGTTCCAATCGCTCACTACTGCACTATATGCTTCCAACTAAGAGACCTTGCGAAGGACTGGTTGCAGAAGAAGAGACTCacaacaacaacgacaacaacaacaacagcaacaacaacaacaacaacaacaacaacaacaacaacaataacaacagcaacaacaGCAGCAGCAGCAGCAGTTCTCTCAAGAAGAATCGGATCGCCGCTGCCAGAACCGCCGATTCTACGGTGAAGAACTACGAAAGCACCGACCAGAGCTTCAACAACAACAACAGCAACAGCGGAAACGCGAGTGAGGGAGCGTCGGATATGGCTTTGGGTGAATCGAACCAGCCGGACATCGATGAGGATCTCCACAGTCGGCAACTCGCCGTGTATGGGCGAGAGACCATGCGGAGGCTCTTTGGTTCCAACGTTCTCGTCTCCGGGATGCAGGGTCTTGGCGTTGAGATTGCTAAGAATCTCATTCTTGCTGGTGTCAAGTCAGTGACCTTGCATGATGAGGGGACTGTGGAGCTGTGGGATCTATCCAGTAACTTTGTGTTTTCAGAGAATGATGTTGGTAAAAACAGGGCAGCAGCTTCTGTTAGTAAGCTGCAGGAGCTCAACAATGCAGTGATTGTACAAAGCTTGACTACTCAGCTGACTAAAGAACACCTTTCCAATTTCCAAGCTGTTGTTTTTACTGATATCAGTCTTGAGAAAGCCTTTGAGTTCAATGATTACTGCCACAGTCATCAGCCTCCTATTGCCTTTATTAAAACTGAAGTTAGAGGCCTTTTTGGTTCTGTGTTCTGTGATTTTGGGCCTGAGTTTACTGTTGTTGATGTGGATGGTGAAGAACCCCATACTGGCATTATTGCATCCATAAGCAATGACAACCCTGCTCTAGTATCCTGTGTTGATGATGAGAGGCTTGAGTTTCAGGATGGAGATCTTGTTGTATTCTCTGAAGTTCATGGTATGAAAGAATTGAATGATGGAAAGCCAAGAAAGATTAAAGATGCTAGAGCATACTCTTTTACTCTTGAAGAAGACACCACAAATTATGGTACGTATGAGAAAGGTGGTATTGTGACGCAGGTCAAACAACCAAAGGTATTGAACTTTAAGCCACTCAAGGAAGCAATCACTGATCCTGGTGATTTTCTTCTGAGTGATTTTTCGAAGTTTGATCGCCCACCTCTCCTTCACTTAGCATTCCAGGCTTTGGATAAATTCATTTCTGAGTTAGGTCGCTTCCCTGTTGCTGGTTCAGAGGATGATGCACAGAAGCTTATATCTGTTGCTAGTCATATTAATGACAGCTTAAGGGATGGGAAATTAGAAGACATAAATCCAAAACTTTTGCGATACTTTGCCTTTGGTTCTAGGGCAGTATTGAATCCTATGGCTGCCATGTTTGGTGGAATTGTTGGACAAGAGGTTGTCAAAGCATGCTCTGGGAAGTTTTACCCACTTTTTCAGTTCTTCTACTTTGACTCTGTGGAGTCACTGCCTTCAGAGCCAGTGGACCCAAATGATTTCAGACCAGTAAATGGTCGTTATGATGCACAGATTTCAGTATTTGGACAGAAATTACAGAAGAAATTAGAGGATTCTAAAGTGTTTGTTGTTGGATCTGGTGCTTTGGGATGTGAATTTTTGAAAAATCTTGCTCTCATGGGAGTTTCTTGTGGAAGTCAGGGGAAGCTCACTATTACTGATGATGATGTGATAGAGAAGAGTAACCTAAGCAGACAGTTCCTTTTCCGTGATTGGAATATTGGACAGGCCAAGTCCACAGTTGCTGCTTCAGCTGCTGCAGCTATAAATCCTAGTTTTAATATTGAAGCTCTACAAAATCGAGTTGGTACTGAAACTGAGAATGTGTTTAATGATACCTTCTGGGAAAACTTGAGTGTCGTTGTAAATGCACTGGACAATGTTAATGCAAGACTATATGTTGATCAGAGATGCTTGTATTTCCAAAAGCCTCTTCTTGAGTCTGGAACTCTGGGAGCCAAATGCAATACGCAGATGGTAATTCCCCACCTGACAGAAAACTATGGTGCATCAAGAGATCCACCTGAGAAGCAGGCACCAATGTGTACTGTACACTCATTTCCACACAACATTGACCATTGCTTGACATGGGCGCGATCTGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCTGAAGTAAATGCATATTTGTCTAACCCAAGTGAATATACTAATGCAATGAAAAATGCTGGTGATGCTCAAGCAAGGGATAACTTGGAGCGTGTTCTTGAGTGCCTAGACCAGGAGAAGTGTGAAACTTTTGAAGATTGTATCACTTGGGCTCGGCTAAAGTTTGAGGATTATTTTGTTAACCGGGTGAAGCAGTTGATCTATACTTTTCCTGAAGATGCTGCAACTAGTACTGGAGCTCCTTTCTGGTCTGCACCAAAAAGATTCCCTCGTCCACTACAATTCTCAGCCTCTGATTTGGGTCATCTAAATTTTGTGTCGTCAGCTTCTATTTTACGGGCAGAAACATTTGGTATCCCAATCCCTGACTGGGGTAAGAACCCTAGGAAGATGGCTGAAGCTGTTGATAGGGTGATAGTACCTGACTTTCAGCCTAAGAAAGATGTGAAAATAGTGACAGATGAGAAGGCCACCAGTCTCTCTACAGCTTCTATAGATGATGCAGCGGTTATTAATGATCTAGTAATCAAGTTAGAGAGGTGCCGGGCAAATCTTCCACCAGTGTTCATGATGAAACCAATTCAATTTGAGAAGGATGATGACACAAACTACCATATGGATGTGATTGCTGGGCTTGCCAACATGAGGGCCCGCAATTACAGCATTCCTGAGGTTGACAAGCTTAAAGCCAAGTTTATTGCTGGACGGATCATTCCTGCAATTGCAACCTCGACTGCCATGGCGACTGGTCTTGTCTGCCTGGAGCTGTACAAAGTTTTGGATGGAGGGCACAAAGTTGAAGACTACAGAAACACATTTGCTAACTTGGCACTGCCTCTCTTTTCAATGGCTGAACCAGTTCCACCGAAAATTATCAAGCATCAAGATATGAGTTGGACGGTTTGGGATAGATGGATTCTCGGAGACAATCCTACCCTCAGGGAACTTCTAGAGTGGCTGAAGGCAAAGGGCTTGAATGCTTACAGTATTTCTTGTGGGAGTTGCCTGCTCTATAATAGCATGTTCCCTCGGCATAAAGATCGAATGGACAAAAAGGTTGCAGATCTGGCAAGGGAAGTAGCCAAGTTTGAAATTCTTGCGTACCGTCGCCATTTGGACGTTGTTGTGGCATGCGAGGATGATGAGGATAATGACATCGACATCCCTCAGATATCCATTTATTTCCGTTAG 5148 0.4433 MAAALECWSRRATTTVHEDHALLMQRPEQDTTPRDSSSSSSSSLVHKKLQKLTRNVSEAIASLKNSLNSTINVESSKLDGPRSLVWTTVLRNLTHLYPGSQLPEKLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMEQALDDEQAAILIQEECDGEIQLQGSVFKLTFACNSPISWPLMSGALDGYSICCKKIQIFEKKGFTLGIVLLLVLSGGGQDKLVRTRVESALKIAMKRLKTGGVKLPFGLCGCQEENSKGRGLGEIEEDGGDAYCGNGFENLSQNIQLHVPLPSSSFLVVIDEWQTIQSGGDEIEKWLLNSDSLEFVEQIAPNSYKGTYMGKRVGIEKLRGCEKGNSYEFELRKDLLALMTCGHRNIMQFCGVCVNDNHGLCVVTKFVEGGSVHDLMLKNKKLSSKDVVRIAADVAEGIKFMNDHGVAYGDLNTQRILLDKHGNACLGDMGIVTACKSVREAIDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILAILLRPSNYNSIQSEVPFLLIPSHPSSNRSLLHYMLPTKRPCEGLVAEEETHNNNDNNNNSNNNNNNNNNNNNNNNSNNSSSSSSSLKKNRIAAARTADSTVKNYESTDQSFNNNNSNSGNASEGASDMALGESNQPDIDEDLHSRQLAVYGRETMRRLFGSNVLVSGMQGLGVEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSENDVGKNRAAASVSKLQELNNAVIVQSLTTQLTKEHLSNFQAVVFTDISLEKAFEFNDYCHSHQPPIAFIKTEVRGLFGSVFCDFGPEFTVVDVDGEEPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMKELNDGKPRKIKDARAYSFTLEEDTTNYGTYEKGGIVTQVKQPKVLNFKPLKEAITDPGDFLLSDFSKFDRPPLLHLAFQALDKFISELGRFPVAGSEDDAQKLISVASHINDSLRDGKLEDINPKLLRYFAFGSRAVLNPMAAMFGGIVGQEVVKACSGKFYPLFQFFYFDSVESLPSEPVDPNDFRPVNGRYDAQISVFGQKLQKKLEDSKVFVVGSGALGCEFLKNLALMGVSCGSQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAAAINPSFNIEALQNRVGTETENVFNDTFWENLSVVVNALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTNAMKNAGDAQARDNLERVLECLDQEKCETFEDCITWARLKFEDYFVNRVKQLIYTFPEDAATSTGAPFWSAPKRFPRPLQFSASDLGHLNFVSSASILRAETFGIPIPDWGKNPRKMAEAVDRVIVPDFQPKKDVKIVTDEKATSLSTASIDDAAVINDLVIKLERCRANLPPVFMMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWILGDNPTLRELLEWLKAKGLNAYSISCGSCLLYNSMFPRHKDRMDKKVADLAREVAKFEILAYRRHLDVVVACEDDEDNDIDIPQISIYFR 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00554 1715 Pfam ThiF family 713 1092 IPR000594 -
Gma18g00554 1715 SMART UBA_e1_C_a_2 1588 1710 IPR018965 -
Gma18g00554 1715 MobiDBLite consensus disorder prediction 669 699 - -
Gma18g00554 1715 ProSiteProfiles Protein kinase domain profile. 284 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00554 1715 Gene3D Transferase(Phosphotransferase) domain 1 316 576 - -
Gma18g00554 1715 ProSitePatterns Ubiquitin-activating enzyme active site. 1289 1297 IPR033127 -
Gma18g00554 1715 MobiDBLite consensus disorder prediction 18 49 - -
Gma18g00554 1715 MobiDBLite consensus disorder prediction 620 660 - -
Gma18g00554 1715 CDD Ube1_repeat1 712 1097 - -
Gma18g00554 1715 Pfam Ubiquitin-activating enzyme E1 four-helix bundle 958 1028 IPR032420 -
Gma18g00554 1715 Gene3D - 875 956 IPR042302 -
Gma18g00554 1715 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 691 1714 IPR045886 -
Gma18g00554 1715 MobiDBLite consensus disorder prediction 29 49 - -
Gma18g00554 1715 Gene3D - 703 821 IPR042449 -
Gma18g00554 1715 PRINTS Ubiquitin-activating enzyme E1 signature 734 758 IPR000011 GO:0008641|GO:0036211
Gma18g00554 1715 PRINTS Ubiquitin-activating enzyme E1 signature 849 876 IPR000011 GO:0008641|GO:0036211
Gma18g00554 1715 PRINTS Ubiquitin-activating enzyme E1 signature 1358 1385 IPR000011 GO:0008641|GO:0036211
Gma18g00554 1715 PRINTS Ubiquitin-activating enzyme E1 signature 1204 1229 IPR000011 GO:0008641|GO:0036211
Gma18g00554 1715 PRINTS Ubiquitin-activating enzyme E1 signature 1157 1180 IPR000011 GO:0008641|GO:0036211
Gma18g00554 1715 Gene3D - 1282 1557 IPR042063 -
Gma18g00554 1715 TIGRFAM Ube1: ubiquitin-activating enzyme E1 707 1715 IPR018075 -
Gma18g00554 1715 MobiDBLite consensus disorder prediction 619 709 - -
Gma18g00554 1715 SUPERFAMILY Protein kinase-like (PK-like) 333 574 IPR011009 -
Gma18g00554 1715 ProSitePatterns Ubiquitin-activating enzyme signature 1. 1072 1080 IPR018074 -
Gma18g00554 1715 Pfam Protein tyrosine and serine/threonine kinase 357 571 IPR001245 GO:0004672|GO:0006468
Gma18g00554 1715 Pfam ThiF family 1110 1605 IPR000594 -
Gma18g00554 1715 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 707 1094 IPR035985 GO:0008641
Gma18g00554 1715 CDD Ube1_repeat2 1129 1668 - -
Gma18g00554 1715 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 1105 1605 IPR035985 GO:0008641
Gma18g00554 1715 Pfam Ubiquitin fold domain 1621 1710 IPR018965 -
Gma18g00554 1715 Pfam Ubiquitin-activating enzyme, SCCH domain 1297 1550 IPR019572 -
Gma18g00554 1715 Pfam Ubiquitin-activating enzyme E1 FCCH domain 887 957 IPR032418 -
Gma18g00554 1715 Gene3D - 1130 1608 - -
Gma18g00554 1715 Gene3D - 832 1120 - -
Gma18g00554 1715 Gene3D - 1623 1713 IPR038252 -
Gma18g00554 1715 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 691 1714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00554 Gma-Chr18 5259774 5276362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00554 697 1715 EF-hand Containing Proteins AT2G30110 83.611 0.0 1802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Gma18g00554 ThiF 3.6e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00554 K03178 - gmx:100780392 2139.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00554 18 5259774 5276362 Gma18g00554 18 5259774 5276362 ECH
Gma18g00554 18 5259774 5276362 Gma11g01860 11 21702725 21710076 GST
Gma18g00554 18 5259774 5276362 Gma02g02172 02 47626480 47632721 PCT
Gma02g02172 02 47626480 47632721 Gma18g00554 18 5259774 5276362 PCT