Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00545 ATGTCGAAGGTGGTTTGTGTCACCGGAGCCAGTGGCGCCATTGGATCATGGGTGGCCCTCCTCCTCCTCCAGCGTGGTTATACGGTCCATGCCACCGTCCAAGACATCAAGGATGAAAATGAGACGAAACATTTGGAGGAAATGGAAGGAGCAAAGAGTCGTCTCCATTTTTTTGAAATGGATCTTCTTGACATCGACTCCATTGCCGCTGCCATAAAGGGTTGCTCCGGCGTAATCCACCTCGCATGTCCTAACATCATCGGTCATGTCGAAGATCCTGAGAAGCAGATACTGGAGCCGGCGATAAAAGGAACAATTAATGTGTTGAAGGCGGCGAAGGAAGCGGGGGTGGAGCGCGTGGTGGCGACTTCGTCGATCTCATCCATTATGCCAAGCCCTAACTGGCCAGCTGATAAGATTAAGGCAGAAGAGTGTTGGACAGACCTTGAATACTGCAAACAGAAGGGGTTGTACTATCCCATTGCAAAGACTCTAGCAGAGAAAGCGGGTTGGGAATTTGCAAAGGAGACAGGTTTTGATGTTGTCATGATAAACCCTGGTACAGCTTTGGGCCCTCTGCTTCCACCAAGAATCAATTCAAGCATGGAAATGCTTGTTAGTGTTCTCAAAGGGGGCAAAGAGACGTACGAGGACTTCTTTATGGGAATGGCTCACTTCAAAGACATAGCATTGGCACATATTTTGGCACTTGAGAACAAGAAAGCAGCAGGAAGGCACTTGTGTGTGGAATCTATTCGTCACTTTAGTGATCTTGTGGACAAGGTTTCTGAGTTATACCCTGAATACGATGTGGTCAAGTTGCCAAAGGATACCCAGCCAGGGTTGTTGAGGGCAAGTACAAAGGATGCATCAACAAAGCTGATTGATTTAGGTCTAGAGTTCACTCCTGTAGACCAAATCATCAAGGATGCAGTGGAGAGTCTGAAGAGCAAGGGCTATGTCTGA 966 0.4783 MSKVVCVTGASGAIGSWVALLLLQRGYTVHATVQDIKDENETKHLEEMEGAKSRLHFFEMDLLDIDSIAAAIKGCSGVIHLACPNIIGHVEDPEKQILEPAIKGTINVLKAAKEAGVERVVATSSISSIMPSPNWPADKIKAEECWTDLEYCKQKGLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLLPPRINSSMEMLVSVLKGGKETYEDFFMGMAHFKDIALAHILALENKKAAGRHLCVESIRHFSDLVDKVSELYPEYDVVKLPKDTQPGLLRASTKDASTKLIDLGLEFTPVDQIIKDAVESLKSKGYV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00545 321 Pfam NAD dependent epimerase/dehydratase family 5 245 IPR001509 -
Gma18g00545 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 313 - -
Gma18g00545 321 CDD FR_SDR_e 5 299 - -
Gma18g00545 321 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 313 - -
Gma18g00545 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 315 IPR036291 -
Gma18g00545 321 Gene3D - 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00545 Gma-Chr18 5139644 5145669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00545 3 321 Monolignol Biosynthesis Gene Families AT5G58490 65.831 1.20e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00545 - - gmx:100137082 636.336