Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00539 ATGACAAGGGTATTTCCAGTCCAGCGTTTGCTACAAGCATCCAACAATGGATTGCTGCAGAAAGGCCTCATTAATCCTGCTCATATCCTGCCACAAAACATGGTTAACATTACTATCAATAACTCCACATTTTCTTACCCCATTTTGTGTCATTCAGTTCAAGATTCTCACTCTGTTGCTATCTTCTATGGTGACAATCCTTTTGTTCACTCCTTCTCACTTGTAATGTTCAATCTCATGATCATCACTGCCATCACGAGCATTTTCCGTATTCTTCTTAAGCCCCTCAAACAACCTCTAATCATATCCCAAATAATAGCTGGTGTGATTGTTGGGCCTTCCTTTTTGGGAGGTATTAGATGGTTCCAAAGTAACATGGAGACTGAGTCAACCAAATTCCTGATAAAAAATCTTGGAAAAATGGGATTCATGTTCTTTGTCTTCGTCTATGGTGTGAAGATGGATCCAACCCTTTTGAAAAAATCAGGGAAATTGCATTTATCTACGTCATTAATTGGCATAATAATACCCATAACGATAGTCGTTGCTGTGGCCCTAAGCATGAAAAAGATCACGGACAAACAAGAGGCCATGATTCCTTCACTAGGAGCAATAGCAGGTTATTTGGGGGTCACATCATTCCCTGTTCTCTACATCATCCTCAAAGAGTTTAACCTTCTAAACTCAGATATGGGTCGATTTGCATTGTACACAGCATTAATTGGTGACACATTGGGTATGATTTTTGTCGTGTTCGTTGAGAAAGGAGAAACAAAGATGTTGACTACCTTATGGTATATAATTTCTTTTGTGGGCTTTTTAGCATTCCTTGCTTTTATTGTTAGGCCCATAATGACATGGATCAATAACAATACCCCACAAGGGCACCCAGTGCAACAGTCCTTTGTGGTTGCTATTCTTCTTGGGGTTTTTGTGATGGGCTTCGTAACTGACATGTTTGGCATCGCAATTTGTAATGGGCCATTGTTTTTGGGCCTGGTAATTCCTGATGGGCCTGGTGTGGGGGCAACACTTGTAAAGAAGGCCGAAACAATTATGAGCGATCTCCTTCTACCATTCTCATTCATTATGGTGGGATCATACACTGATTTCTATGCCATGAGCGCTTCTGGTTGGTCAAGTTTGTCACCATTGTTTGTCATGGTTGTTACTGGCTACATTATCAAATTCATTTCCATTTGGATTGTTCTATATTTCTGGCGAATGCCACTCAGAAATGGACTAGCCGTTAGCCTCATTATGAGCTTAAGAGGCCATGTTGAACTTATATTGTTTGTGGCATGGATGGAGAAAAAAATCTTGAAGGTTCCAGCCTTCACATTACTGATTATTATGACAGTAGCAGTGACAGCAACATGCTCTCCTTTGATCAACATATTATATGATCCAACAAAGCCATACATGGTGAGCCAAAGGCGGAACATTCAACACAACCCTCCAGACCAAGAGCTTAGAATAGTGTTATGTATTCTTGACACTGAAGCCATAAATGGTCTCATCCGTTTGCTTGATATCTCAAATCCAACCTCAAGCAGCCCCTTTTCAATTTCTGTTGTTAGACTAACTGAGCTTGTAGGGCGTTCCAGCCCTTTGTTCATAGACCATGAAAAGCAACAAGTTCCTCCCATTTATCAATGGACAAACACCATAAACGTCCTTGAACACCATCAGGAACTCAAGGGAATGTCCATGCAGCTCCATTTCTTCACATCTGTGGCCCCAAAGCAGTCAATGTTCCGAGACATATGTGAGCTTGCCCTAGAACAAGAAGCTTCTTTGATCATCTTACCTTTCGACAGTGCTGATGTTCACGACCATGCAGCGAGAGCAGTGAATTCACAGGTCTTGAACAATGCACCTTGCTCAGTTGCAATTTTTGTTGATAAGGGTCTTCTTGAAATCAACAAAATAGGTAGTTCCATTCGTCGAACTCCATATCGATTCGCCGTGTTGTTTCTTGGGGGTGGAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGGATGGTTGCTAACCAAGATGTGTTCCTCGAAGTTGTAAGGTTTCTCCCTGAGAACTTTCTAAGGTACAATGATATTGAGAGGAAGCTTGATGATGGAATTGTGACTTGGTTTTGTGTTAAGAATGAGATGACTCAAAGAGTGGTGTATAGAGAGGTACTGGTTAGAAATGGAGAGGAAACAATTGAAAGAATTCAAGATATGAATGATGGTGCTTTTGATCTTTTCATAGTGGGAAGGAAACATGGAATAAACCCTATTCTTCTCACTGGATTATCAGAATGGAGTGAAAGTGAAGATTTGGGACTCATAGGAGACTATATTTCCTCTGCAGATTTTTTTGGCTCGGCTTCTGTTTTAGTTGTTCAACAACAAATCTTAAGAGGCTAA 2409 0.4076 MTRVFPVQRLLQASNNGLLQKGLINPAHILPQNMVNITINNSTFSYPILCHSVQDSHSVAIFYGDNPFVHSFSLVMFNLMIITAITSIFRILLKPLKQPLIISQIIAGVIVGPSFLGGIRWFQSNMETESTKFLIKNLGKMGFMFFVFVYGVKMDPTLLKKSGKLHLSTSLIGIIIPITIVVAVALSMKKITDKQEAMIPSLGAIAGYLGVTSFPVLYIILKEFNLLNSDMGRFALYTALIGDTLGMIFVVFVEKGETKMLTTLWYIISFVGFLAFLAFIVRPIMTWINNNTPQGHPVQQSFVVAILLGVFVMGFVTDMFGIAICNGPLFLGLVIPDGPGVGATLVKKAETIMSDLLLPFSFIMVGSYTDFYAMSASGWSSLSPLFVMVVTGYIIKFISIWIVLYFWRMPLRNGLAVSLIMSLRGHVELILFVAWMEKKILKVPAFTLLIIMTVAVTATCSPLINILYDPTKPYMVSQRRNIQHNPPDQELRIVLCILDTEAINGLIRLLDISNPTSSSPFSISVVRLTELVGRSSPLFIDHEKQQVPPIYQWTNTINVLEHHQELKGMSMQLHFFTSVAPKQSMFRDICELALEQEASLIILPFDSADVHDHAARAVNSQVLNNAPCSVAIFVDKGLLEINKIGSSIRRTPYRFAVLFLGGGDAREALVYADRMVANQDVFLEVVRFLPENFLRYNDIERKLDDGIVTWFCVKNEMTQRVVYREVLVRNGEETIERIQDMNDGAFDLFIVGRKHGINPILLTGLSEWSESEDLGLIGDYISSADFFGSASVLVVQQQILRG 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00539 802 PANTHER CATION/H + ANTIPORTER 46 801 - -
Gma18g00539 802 Pfam Sodium/hydrogen exchanger family 81 458 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma18g00539 802 Gene3D - 73 473 IPR038770 -
Gma18g00539 802 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 46 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00539 Gma-Chr18 5100292 5103433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00539 26 799 Antiporter Super Family AT5G37060 39.731 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00539 - - gmx:100806621 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00539 18 5100292 5103433 Gma18g00539 18 5100292 5103433 ECH
Gma18g00539 18 5100292 5103433 Gma11g01838 11 21257338 21260371 GST