Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00533 ATGAAAGTAGGCCAGGACGACAACCTCATTCACAATGCCATGCATGCTGGAATTACCAAGGCAGAAACGTTGTTTGGAGGTTCTTTCATATGCCACAGTACAGCTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCTCTTGCATATTATCTCCCTGTCTTCTTGCTCCAACTTTGCCTCATATTCATCTTTACCCATTTCATTCATCTTATTCTCAAGCCATTTGGTCAACCGTCTTTTGTTTCTCAGATTATTGGTGGTGTGACTTTAGGTCCTTCTATTCTTGGGCGCAACACAGCATTCATTGACAAGGTTTTCCCATCAAAAGGAAGAAATGTGATTGATACCATGGGCTTTTTCGGTTTTATGTTATTTGTCTTCTTAACTGGGGTAAAGATAGATCCAACCATCACTTTTAGATCAGGCAAAAGGACTTTTGCCATAGGAATTTTAGGCTACTTTGTTCCTTACACTTTTGCCAAAACGGTTGTCTTTATGCTCACACGCTTTGCAACATTGGATAGTGATGTCTCTAAGGTGCTTCCTATTGTGATAGAAATTCAATGTATCTCAGCCTTTCCAGTAATTACTCGTTTTCTTGTTGAGCTTCAGATCCTCAATTCAGAGATTGGGCGATTGGCCACTTCTTCTTCATTAGTGTGTGATATTTGTTTCCTTTTTGTTATGACAATAAAGTTTGTTGCAAGGTTATCCTCCACAAAGTCAATAGGAACATCTATTGGATCTTTCTTGTCCCCCACGCTATTTCTTATATTCATCATCTTTGTAGTTCACCCAGCTGCAATATGGGCAATTCGACAATCACCAGAAGGGAAACCTGTTCAAGAAATTTATATATGTGGTGTTTTTCTAACACTAATATTTTGTGGATTCTTAGGTGAAGTTTTTGGCCTAAATGCGATTGTTGTATCTTTCTTTGTGGGGCTGGCTATACCAGATGGTCCACCATTAGGAGCGGCATTGGTAAATAAGCTTGATTCCTTTGTTTCAGTGGTGTTCGTGCCTATCCTTTTTATAATAGTTGGATTAAGGACAGATGTGTACGCCATACAGAAGATGAAGAACATAGCTACAATTCAATTCATTATCTGCATTGCTTTTTGTGGGAAAGTTTTAGGGGCTTTATTACCTCTCATCTTCCTTAGGATGCCATTCCGAGATGCCTTTGCTCTTGGTCTTATAATGAACTGCAAAGGCACTATTGAATTGTACTTGTTGATTAGCTTGAAATTAAAAAAAGCCATGAATGATGAATGCTTTACAATTTTGGTTCTTACTTTAGTGCTTGTAGCCGGGATTGTGTCACCTATTGTGAAAACTCTATATGATCCTTCTAAGAGGTTTCTTGCTTACAAAAGGAGGACAATTATGCATCACAGAAAGGATGAAGAACTACGCATACTAGCTTGTATTCATAGACATGATAATGTTTTGGCTATTATGAACCTCCTTGCAGCTTCCAACCCCACTAAAGCAAGCCCTATTAACTTAGTTGTGCTTCAGCTTATTAAGCTTGTGGGGAGATCTTCCTCTCTTCTTGTTGCACACGTGCCGCGAAAAATGCTTAGTCACCATTCTACTCAAACTGAAAAGATTTTCAACTCATTCAACAAGTTTGAAGATGTATACAAGGGCAAGGTCACACTACATTCCTATAAGGGCATTTCTCCTTATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATCATCATACCTTTTCATAAGCAATGGATACTTGGAGGGACAACTGAGTCATCTTTTGCTTTTAAGCAGCTCAATAAGAATGTCCTAGAGAAAGCTCCTTGCTCAGTTGGTGTCCTCATTGATCGTGGTAACCAAAAGATGTTTTGGTGTGGCTTCAAAAAGGGATCAATATATCAAGTAGCTATGCTCTTCTTTGGTGGTGCAGATGATCGAGAAGCACTTTCATATGCGAGACGCATGTTAGATCAACCTTATGTACATATTACTCTTTTTCATTTCTCATCTCCAACTGAGATTGTTGGAGGAACAGAAAGGAGCAAAATGCTTGACACACAGATCTTGAGTGAGTTTAGGCTTAAGGCTTTTCGGAATGAGAGAGTTTCTTACAAAGAGGAGATGGTAATGGATGGAAAGGATGTACTTTCAGTTATTGAATACATGGAGAGTTGTTATGACCTTGTCATGGTTGGGAGGAAGCACGCAGATTCAAAATTAATGTCAGAAATTGGAAAATGGAAGCATGGAGAATTGGGAATTATAGGAGAGATTCTTGCCTCTTTAAATATAGGAGCCAAAACATCAATTTTAGTTGTGCAACAACAAACCAGATTTTGGGGATCACGTGATCCAGAAGAATCCACACATTTGAGAAAAGAAGATATATAG 2424 0.3878 MKVGQDDNLIHNAMHAGITKAETLFGGSFICHSTANQINSKGIWFGDDPLAYYLPVFLLQLCLIFIFTHFIHLILKPFGQPSFVSQIIGGVTLGPSILGRNTAFIDKVFPSKGRNVIDTMGFFGFMLFVFLTGVKIDPTITFRSGKRTFAIGILGYFVPYTFAKTVVFMLTRFATLDSDVSKVLPIVIEIQCISAFPVITRFLVELQILNSEIGRLATSSSLVCDICFLFVMTIKFVARLSSTKSIGTSIGSFLSPTLFLIFIIFVVHPAAIWAIRQSPEGKPVQEIYICGVFLTLIFCGFLGEVFGLNAIVVSFFVGLAIPDGPPLGAALVNKLDSFVSVVFVPILFIIVGLRTDVYAIQKMKNIATIQFIICIAFCGKVLGALLPLIFLRMPFRDAFALGLIMNCKGTIELYLLISLKLKKAMNDECFTILVLTLVLVAGIVSPIVKTLYDPSKRFLAYKRRTIMHHRKDEELRILACIHRHDNVLAIMNLLAASNPTKASPINLVVLQLIKLVGRSSSLLVAHVPRKMLSHHSTQTEKIFNSFNKFEDVYKGKVTLHSYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWILGGTTESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKMFWCGFKKGSIYQVAMLFFGGADDREALSYARRMLDQPYVHITLFHFSSPTEIVGGTERSKMLDTQILSEFRLKAFRNERVSYKEEMVMDGKDVLSVIEYMESCYDLVMVGRKHADSKLMSEIGKWKHGELGIIGEILASLNIGAKTSILVVQQQTRFWGSRDPEESTHLRKEDI 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00533 807 PANTHER CATION/H + ANTIPORTER 27 792 - -
Gma18g00533 807 Pfam Sodium/hydrogen exchanger family 63 448 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma18g00533 807 Gene3D - 56 458 IPR038770 -
Gma18g00533 807 Coils Coil 804 807 - -
Gma18g00533 807 PANTHER OS08G0117800 PROTEIN 27 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00533 Gma-Chr18 5018425 5021091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00533 19 801 Antiporter Super Family AT2G13620 37.978 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00533 - - gmx:102665255 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00533 18 5018425 5021091 Gma18g00533 18 5018425 5021091 ECH
Gma18g00533 18 5018425 5021091 Gma14g01973 14 50593241 50597069 PCT
Gma14g01973 14 50593241 50597069 Gma18g00533 18 5018425 5021091 PCT