Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00526 ATGGCAAACCTAAAGACACACCTTGTCCTTAATATGAAGGATGTTGTGATAGTTAAACCCTCCAAGCCCACACCATCTGAACTTCTTTCTTTGTCCACCATTGACAGTGATCCAGTTCTCAACATTCTGTGTCAAACCATTTACGTCTACAAAGCAAATCTTGATTCCCCAAATGATCAACTAGACCCTGTAAATGTGATAAAAGAAGCTCTCTCAAAGGCCTTGGTTTACTATTATCCACTTGCTGGGAAGATAGTAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCAGATGGAGTTCCATTCTTGGAGGCAACTGCTGACTGTGAACTCTCTTCTCTTCACTACCTTGAAGGGATTGATGTTACAACTGCACAGAAACTGGTGTTTGATAACCCTAATTCTCAAGATGAAGCTAGTGATCACCCTTTGGTTTTTAAGGTGACCAAGTTTCTCTGTGGGGGTTGCACCCTTGGAATGGGCTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAGTTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCAGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAGCCACTCCAATTTCCTATAGATGAGGCTTCAAGGGCAGTTTCACCATTTTGGCCAACCAAGGAGATTTCACATGAATGCTTTAACTTAAACGGTAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGATGATGTAAAGGAAAGCTTCACAACTGTTGAAGCACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAGCTCTGATGGGAAAACTATGCTGTGTTTAGCAGTAGGGGTGAGGCACCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCCTTTGTGGGTTCAAATGTGGTGCTGACAGTGAAAGAACTTGATGAAAACCCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCTAGTAATGAGTACATCAGAAACACTATAAACATGTTGGAGACAATGAGACAAAGGAACATTAGGGTTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGGCAGCTGAGTTTGATGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAGTACCAGTTCCATGGAACATTTTAGGGTATGTGGACTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCAAAGTTCAGGGAGGAGATGGAGGCCCTCAAGCTTATGAGAGGTGATGAGGGTAGCACCCAGCAATAA 1383 0.4353 MANLKTHLVLNMKDVVIVKPSKPTPSELLSLSTIDSDPVLNILCQTIYVYKANLDSPNDQLDPVNVIKEALSKALVYYYPLAGKIVTFDDGKLGINCNADGVPFLEATADCELSSLHYLEGIDVTTAQKLVFDNPNSQDEASDHPLVFKVTKFLCGGCTLGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEPLQFPIDEASRAVSPFWPTKEISHECFNLNGKSIQRLKMELMKESDDVKESFTTVEALGAYVWRSRARALELSSDGKTMLCLAVGVRHLLDPPLPEGYYGNAFVGSNVVLTVKELDENPLSEVVKLIKESKKLPSSNEYIRNTINMLETMRQRNIRVEGTCASVVLTDWRQLSLMEEVDFGWKASVNIVPVPWNILGYVDLCLFLPPSNLDPSMKGGVRVFVSLPKASMPKFREEMEALKLMRGDEGSTQQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00526 460 PANTHER ACYL TRANSFERASE 4 5 449 - -
Gma18g00526 460 Pfam Transferase family 16 447 - -
Gma18g00526 460 Gene3D - 7 210 IPR023213 -
Gma18g00526 460 Gene3D - 227 445 IPR023213 -
Gma18g00526 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00526 Gma-Chr18 4965186 4966735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00526 10 443 Monolignol Biosynthesis Gene Families AT5G48930 27.578 1.14e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00526 K20240 - gmx:100801843 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00526 18 4965186 4966735 Gma18g00526 18 4965186 4966735 ECH
Gma18g00526 18 4965186 4966735 Gma11g01823 11 20984626 20985234 GST